RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 VANGL1Q8TAA9 524 aaPredicted RBP10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 ZPLD1Q8TCW7 415 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 DNAJA4Q8WW22 397 aaPredicted RBP10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 SMPDL3BQ92485 455 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 SLC47A1Q96FL8 570 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 PRDM14Q9GZV8 571 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 PCDHAC1Q9H158 963 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 MMADHCQ9H3L0 296 aaPredicted RBP10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 CTPS2Q9NRF8 586 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 PNPLA3Q9NST1 481 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 DCAF13Q9NV06 445 aaKnown RBP10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 ACTR3BQ9P1U1 418 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 TMED7Q9Y3B3 224 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 M0R3H8 397 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 ARPC2O15144 300 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 EFNA2O43921 213 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 PDE5AO76074 875 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 WISP1O95388 367 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 OPN1LWP04000 364 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 TFPIP10646 304 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 PNMTP11086 282 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 CCNA2P20248 432 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 ACVR2AP27037 513 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 CA7P43166 264 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 CLDN18P56856 261 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 KCNC4Q03721 635 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 OR1Q1Q15612 314 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 SGCBQ16585 318 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 MTX3Q5HYI7 312 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 ESPNLQ6ZVH7 1005 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 COMTD1Q86VU5 262 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 ULK2Q8IYT8 1036 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 UBQLNLQ8IYU4 475 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 OR6T1Q8NGN1 323 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 RNF217Q8TC41 542 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 SLC25A43Q8WUT9 341 aaPredicted RBP10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 RELTQ969Z4 430 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 ZNF524Q96C55 264 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 PYURFQ96I23 114 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 CLPTM1LQ96KA5 538 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 LRGUKQ96M69 825 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 NPAS1Q99742 590 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 PRR14Q9BWN1 585 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 TRIM15Q9C019 465 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 C12orf10Q9HB07 376 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 TIGARQ9NQ88 270 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 PAQR5Q9NXK6 330 aaPredicted RBP10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 CHRNA9Q9UGM1 479 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 OSGIN1Q9UJX0 560 aa10.74□□□□□ -0.69
SPTLC1-202ENST00000337841 A0A1B0GWA3 101 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 ELOA3DA6NLF2 546 aaPredicted RBP10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 E9PLN8 166 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 CCL21O00585 134 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 EIF1AYO14602 144 aaKnown RBP10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 SEC14L5O43304 696 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 ZNF208O43345 1280 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 PRKD3O94806 890 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 IFNW1P05000 195 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 IL11P20809 199 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 SLC7A1P30825 629 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 SFTPDP35247 375 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 OR1E2P47887 323 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 UQCRFS1P47985 274 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 CLDN20P56880 219 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 CARD18P57730 90 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 GABPB1Q06547 395 aaPredicted RBP10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 ELOA3BQ3SY89 546 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 EMC4Q5J8M3 183 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 ENTPD8Q5MY95 495 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 DCST1Q5T197 706 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 C1orf185Q5T7R7 199 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 C1QL3Q5VWW1 255 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 C3orf33Q6P1S2 294 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 MTFR2Q6P444 385 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 PGM2L1Q6PCE3 622 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 ZNF613Q6PF04 617 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 RBM45Q8IUH3 476 aaKnown RBP10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 ELOA3Q8NG57 546 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 OR10Q1Q8NGQ4 319 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 OR2V1Q8NHB1 315 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 GEMIN6Q8WXD5 167 aaKnown RBP10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 OSTF1Q92882 214 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 DDIT4LQ96D03 193 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 ASB9Q96DX5 294 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 HSH2DQ96JZ2 352 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 KLHL15Q96M94 604 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 VKORC1Q9BQB6 163 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 WFDC6Q9BQY6 131 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 CADM1Q9BY67 442 aaKnown RBP10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 POLR2J2Q9GZM3 115 aaKnown RBP10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 POLR2J3Q9H1A7 115 aaKnown RBP10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 LRMDAQ9H2I8 198 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 TMEM185BQ9H7F4 350 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 CALHM2Q9HA72 323 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 SH3BGRL2Q9UJC5 107 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 TINAGQ9UJW2 476 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 FAM32AQ9Y421 112 aaKnown RBP10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 EML6Q6ZMW3 1958 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 EXPH5Q8NEV8 1989 aa10.73□□□□□ -0.69
SPTLC1-202ENST00000337841 A0A0J9YW62 118 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms