RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 LIMS3P0CW19 117 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 LIMS4P0CW20 117 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 LCN6P62502 163 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 HSD11B2P80365 405 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 TOMM34Q15785 309 aaPredicted RBP11.57□□□□□ -0.56
LIMK1-201ENST00000336180 ZNF404Q494X3 552 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 CRTC2Q53ET0 693 aaPredicted RBP11.57□□□□□ -0.56
LIMK1-201ENST00000336180 MFSD4AQ8N468 514 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 EID2Q8N6I1 236 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 CLDN22Q8N7P3 220 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 CADM4Q8NFZ8 388 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 C8orf44Q96CB5 159 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 STACQ99469 402 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 NDC1Q9BTX1 674 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 NUDT9Q9BW91 350 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 LANCL2Q9NS86 450 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 CNOT2Q9NZN8 540 aaKnown RBP11.57□□□□□ -0.56
LIMK1-201ENST00000336180 KLK4Q9Y5K2 254 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 CDH10Q9Y6N8 788 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 FER1L5A0AVI2 2057 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 TMEM131Q92545 1883 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 PRODHO43272 600 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 TBXA2RP21731 343 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 ITPKBP27987 946 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 RPL4P36578 427 aaKnown RBP11.56□□□□□ -0.56
LIMK1-201ENST00000336180 MAP3K8P41279 467 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 GAS1P54826 345 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 CLDN6P56747 220 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 ZMAT1Q5H9K5 638 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 PRAMEF8Q5VWM4 474 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 PRAMEF7Q5VXH5 474 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 ZNF574Q6ZN55 896 aaPredicted RBP11.56□□□□□ -0.56
LIMK1-201ENST00000336180 PHC2Q8IXK0 858 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 UBE2J2Q8N2K1 259 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 SPRYD4Q8WW59 207 aaPredicted RBP11.56□□□□□ -0.56
LIMK1-201ENST00000336180 ZNRF4Q8WWF5 429 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 ZMYND19Q96E35 227 aaPredicted RBP11.56□□□□□ -0.56
LIMK1-201ENST00000336180 MSANTD3Q96H12 275 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 HS6ST2Q96MM7 605 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 TSSK2Q96PF2 358 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 BARHL1Q9BZE3 327 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 AKIP1Q9NQ31 210 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 ZNF223Q9UK11 482 aaPredicted RBP11.56□□□□□ -0.56
LIMK1-201ENST00000336180 GRIP1Q9Y3R0 1128 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 DUX1O43812 170 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 PRAMEF2O60811 474 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 CLPSP04118 112 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 OCM2P0CE71 109 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 OCMP0CE72 109 aaPredicted RBP11.56□□□□□ -0.56
LIMK1-201ENST00000336180 RPS4Y1P22090 263 aaKnown RBP11.56□□□□□ -0.56
LIMK1-201ENST00000336180 RPS27P42677 84 aaKnown RBP11.56□□□□□ -0.56
LIMK1-201ENST00000336180 C4orf46Q504U0 113 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 MANEAQ5SRI9 462 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 FAM27D1Q5T7N8 215 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 BMP8AQ7Z5Y6 402 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 ZNF595Q8IYB9 648 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 ZNF615Q8N8J6 731 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 GALNT6Q8NCL4 622 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 OR7G1Q8NGA0 311 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 OR52E2Q8NGJ4 325 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 OSTF1Q92882 214 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 ERMAPQ96PL5 475 aaPredicted RBP11.56□□□□□ -0.56
LIMK1-201ENST00000336180 MND1Q9BWT6 205 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 GTPBP2Q9BX10 602 aaKnown RBP11.56□□□□□ -0.56
LIMK1-201ENST00000336180 NUAK2Q9H093 628 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 PCNX3Q9H6A9 2034 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 IL20Q9NYY1 176 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 SEC14L4Q9UDX3 406 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 METTL15A6NJ78 407 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 C12orf71A8MTZ7 269 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 GTPBP1O00178 669 aaKnown RBP11.56□□□□□ -0.56
LIMK1-201ENST00000336180 CDC40O60508 579 aaKnown RBP eCLIP11.56□□□□□ -0.56
LIMK1-201ENST00000336180 OPN1LWP04000 364 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 THBS1P07996 1170 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 C1QL3Q5VWW1 255 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 MARCH3Q86UD3 253 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 OR52L1Q8NGH7 329 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 SLC2A12Q8TD20 617 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 RASD2Q96D21 266 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 SIAEQ9HAT2 523 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 PALMDQ9NP74 551 aa11.56□□□□□ -0.56
LIMK1-201ENST00000336180 TESQ9UGI8 421 aaKnown RBP11.56□□□□□ -0.56
LIMK1-201ENST00000336180 CEP192Q8TEP8 1941 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 TEX51A0A1B0GUA7 166 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 MCIDASD6RGH6 385 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 E9PI62 339 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 KLF4O43474 513 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 SIGLEC6O43699 453 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 SSX4O60224 188 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 ICOSLGO75144 302 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 F13BP05160 661 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 FBLP22087 321 aaKnown RBP11.55□□□□□ -0.56
LIMK1-201ENST00000336180 STAT5AP42229 794 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 ERVK-25P63136 954 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 FOXK2Q01167 660 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 NCF4Q15080 339 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 OCLNQ16625 522 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 FAM98AQ8NCA5 519 aaKnown RBP11.55□□□□□ -0.56
LIMK1-201ENST00000336180 ATP6V1C2Q8NEY4 427 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 FGF11Q92914 225 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms