RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 OR2J2O76002 312 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 SRP72O76094 671 aaKnown RBP1.26□□□□□ -2.21
LINC00643-201ENST00000334389 TSPAN15O95858 294 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 MT-CO1P00395 513 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 IGF1P05019 195 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 WNT2P09544 360 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 LTA4HP09960 611 aaKnown RBP1.26□□□□□ -2.21
LINC00643-201ENST00000334389 KRT3P12035 628 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 DAOP14920 347 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 FERP16591 822 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 KRT4P19013 534 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 APOBEC1P41238 236 aaKnown RBP1.26□□□□□ -2.21
LINC00643-201ENST00000334389 MAGEA3P43357 314 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 CDX1P47902 265 aaPredicted RBP1.26□□□□□ -2.21
LINC00643-201ENST00000334389 CLDN6P56747 220 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 PRPS1P60891 318 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 MEF2CQ06413 473 aaPredicted RBP1.26□□□□□ -2.21
LINC00643-201ENST00000334389 C17orf67Q0P5P2 114 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 PRSS8Q16651 343 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 PTPN20Q4JDL3 420 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 WASHC2DQ5SRD0 308 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 SYPL2Q5VXT5 272 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 B3GLCTQ6Y288 498 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF841Q6ZN19 808 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 HDXQ7Z353 690 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 GALNTL5Q7Z4T8 443 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 GALNT10Q86SR1 603 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 RELL1Q8IUW5 271 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 CCDC170Q8IYT3 715 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 MCOLN2Q8IZK6 566 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF527Q8NB42 609 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 GPR26Q8NDV2 337 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 OR8K1Q8NGG5 319 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 OR1K1Q8NGR3 316 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 ACMSDQ8TDX5 336 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 DIO2Q92813 273 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 SEMA4DQ92854 862 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 MRRFQ96E11 262 aaKnown RBP1.26□□□□□ -2.21
LINC00643-201ENST00000334389 PIK3IP1Q96FE7 263 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 MARS2Q96GW9 593 aaKnown RBP1.26□□□□□ -2.21
LINC00643-201ENST00000334389 SLC41A3Q96GZ6 507 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 CELF6Q96J87 481 aaKnown RBP1.26□□□□□ -2.21
LINC00643-201ENST00000334389 CDK5RAP3Q96JB5 506 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF488Q96MN9 340 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 TECTBQ96PL2 329 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 NODALQ96S42 347 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 KLHL4Q9C0H6 718 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 WNT5BQ9H1J7 359 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 MUC13Q9H3R2 512 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 ZWILCHQ9H900 591 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 GLOD4Q9HC38 313 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 FAM60AQ9NP50 221 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 HOMER3Q9NSC5 361 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 SERTAD4Q9NUC0 356 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 OR5V1Q9UGF6 321 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 ITGB1BP2Q9UKP3 347 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 ACAD8Q9UKU7 415 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF232Q9UNY5 417 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 MRPS28Q9Y2Q9 187 aaKnown RBP1.26□□□□□ -2.21
LINC00643-201ENST00000334389 TTLL3Q9Y4R7 772 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 OR1A2Q9Y585 309 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 MAB21L2Q9Y586 359 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 PCDHGB5Q9Y5G0 923 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 SPACA6W5XKT8 324 aa1.26□□□□□ -2.21
LINC00643-201ENST00000334389 HEATR5BQ9P2D3 2071 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 TRAV39A0A0B4J263 110 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 A0A1B0GVI7 797 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SMTNL1A8MU46 457 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 LGALS16A8MUM7 142 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 NPIPA5E9PKD4 350 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 TXNL1O43396 289 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SSX5O60225 188 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 GPR137BO60478 399 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 FCMRO60667 390 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 FMO6PO60774 539 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 NOS1APO75052 506 aaPredicted RBP1.25□□□□□ -2.21
LINC00643-201ENST00000334389 FBXO24O75426 580 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 CRCPO75575 148 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 WDR47O94967 919 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 ALOX15P16050 662 aaPredicted RBP1.25□□□□□ -2.21
LINC00643-201ENST00000334389 MSH3P20585 1137 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 ADRA1DP25100 572 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SHC1P29353 583 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 TACR3P29371 465 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 ERP29P30040 261 aaKnown RBP1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SRP14P37108 136 aaKnown RBP1.25□□□□□ -2.21
LINC00643-201ENST00000334389 STAT6P42226 847 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 MAGEA4P43358 317 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 VPS41P49754 854 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 CCR8P51685 355 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 XKP51811 444 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 PPP5CP53041 499 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 PGGT1BP53609 377 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 HAND2P61296 217 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SARNPP82979 210 aaKnown RBP1.25□□□□□ -2.21
LINC00643-201ENST00000334389 TGFBR3Q03167 851 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 GPS1Q13098 491 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 RBBP5Q15291 538 aaKnown RBP1.25□□□□□ -2.21
LINC00643-201ENST00000334389 SEC23BQ15437 767 aa1.25□□□□□ -2.21
LINC00643-201ENST00000334389 ADRM1Q16186 407 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms