RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 IZUMO2Q6UXV1 221 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 GDF7Q7Z4P5 450 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 ZNF605Q86T29 641 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 CROCCP3Q8IVE0 287 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 CMIPQ8IY22 773 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 ZFP62Q8NB50 900 aaPredicted RBP14.96□□□□□ -0.01
SHOX-201ENST00000334060 TMEM255BQ8WV15 326 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 PMM1Q92871 262 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 PRSS27Q9BQR3 290 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 SLC13A4Q9UKG4 626 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 BLOC1S6Q9UL45 172 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 KMT2BQ9UMN6 2715 aaPredicted RBP14.95□□□□□ -0.02
SHOX-201ENST00000334060 ANKUB1A6NFN9 424 aa14.95□□□□□ -0.02
SHOX-201ENST00000334060 LRRN3E7EW58 273 aa14.95□□□□□ -0.02
SHOX-201ENST00000334060 STAMBPO95630 424 aa14.95□□□□□ -0.02
SHOX-201ENST00000334060 UQCRBP14927 111 aa14.95□□□□□ -0.02
SHOX-201ENST00000334060 ENDOUP21128 410 aaKnown RBP14.95□□□□□ -0.02
SHOX-201ENST00000334060 DPP4P27487 766 aa14.95□□□□□ -0.02
SHOX-201ENST00000334060 GDF1P27539 372 aa14.95□□□□□ -0.02
SHOX-201ENST00000334060 TACR3P29371 465 aa14.95□□□□□ -0.02
SHOX-201ENST00000334060 RRM2P31350 389 aa14.95□□□□□ -0.02
SHOX-201ENST00000334060 STARP49675 285 aa14.95□□□□□ -0.02
SHOX-201ENST00000334060 ELOAQ14241 798 aaKnown RBP14.95□□□□□ -0.02
SHOX-201ENST00000334060 MTX3Q5HYI7 312 aa14.95□□□□□ -0.02
SHOX-201ENST00000334060 PLEKHM3Q6ZWE6 761 aa14.95□□□□□ -0.02
SHOX-201ENST00000334060 PAPD5Q8NDF8 572 aaKnown RBP14.95□□□□□ -0.02
SHOX-201ENST00000334060 FAM83FQ8NEG4 500 aaPredicted RBP14.95□□□□□ -0.02
SHOX-201ENST00000334060 ATP6V1C2Q8NEY4 427 aa14.95□□□□□ -0.02
SHOX-201ENST00000334060 ZNF563Q8TA94 476 aa14.95□□□□□ -0.02
SHOX-201ENST00000334060 OR11A1Q9GZK7 315 aa14.95□□□□□ -0.02
SHOX-201ENST00000334060 CACYBPQ9HB71 228 aaKnown RBP14.95□□□□□ -0.02
SHOX-201ENST00000334060 EXOSC3Q9NQT5 275 aaKnown RBP14.95□□□□□ -0.02
SHOX-201ENST00000334060 SLC9A8Q9Y2E8 581 aa14.95□□□□□ -0.02
SHOX-201ENST00000334060 KLF13Q9Y2Y9 288 aaPredicted RBP14.95□□□□□ -0.02
SHOX-201ENST00000334060 SVILO95425 2214 aa14.95□□□□□ -0.02
SHOX-201ENST00000334060 A0A0B4J2E0 115 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 A0A1B0GVG6 124 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 A0A1B0GX12 115 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 KPNA4O00629 521 aaPredicted RBP14.94□□□□□ -0.02
SHOX-201ENST00000334060 EIF4E2O60573 245 aaKnown RBP14.94□□□□□ -0.02
SHOX-201ENST00000334060 TRAPPC6AO75865 159 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 SNX4O95219 450 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 GPIP06744 558 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 FUT1P19526 365 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 KLK2P20151 261 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 RPL5P46777 297 aaKnown RBP14.94□□□□□ -0.02
SHOX-201ENST00000334060 CLK3P49761 638 aaKnown RBP14.94□□□□□ -0.02
SHOX-201ENST00000334060 PSMD7P51665 324 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 B3GALT5-AS1P59052 145 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 PLGLB1Q02325 96 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 KCNC4Q03721 635 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 C3AR1Q16581 482 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 RASSF5Q8WWW0 418 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 BBC3Q96PG8 261 aaPredicted RBP14.94□□□□□ -0.02
SHOX-201ENST00000334060 UGT2B28Q9BY64 529 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 NMNAT1Q9HAN9 279 aaPredicted RBP14.94□□□□□ -0.02
SHOX-201ENST00000334060 KLHL28Q9NXS3 571 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 TAS2R10Q9NYW0 307 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 OSGIN1Q9UJX0 560 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 IGKV1D-42A0A075B6H8 117 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 PPIAP62937 165 aaKnown RBP14.94□□□□□ -0.02
SHOX-201ENST00000334060 CBFBQ13951 182 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 TRILQ7L0X0 811 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 PFN4Q8NHR9 129 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 DUS3LQ96G46 650 aaKnown RBP14.94□□□□□ -0.02
SHOX-201ENST00000334060 SLC41A3Q96GZ6 507 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 ACER3Q9NUN7 267 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 RIMS3Q9UJD0 308 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 ACAD8Q9UKU7 415 aa14.94□□□□□ -0.02
SHOX-201ENST00000334060 MPDZO75970 2070 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 DNAJC13O75165 2243 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 CST1P01037 141 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 HK1P19367 917 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 PRKACGP22612 351 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 TAS2R41P59536 307 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 SPIBQ01892 262 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 CISD2Q8N5K1 135 aaKnown RBP14.93□□□□□ -0.02
SHOX-201ENST00000334060 TMEM178AQ8NBL3 297 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 TOR1AIP2Q8NFQ8 470 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 PRRC1Q96M27 445 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 MAGIXQ9H6Y5 334 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 ARMC1Q9NVT9 282 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 TESQ9UGI8 421 aaKnown RBP14.93□□□□□ -0.02
SHOX-201ENST00000334060 TMEM72A0PK05 275 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 KLRC4-KLRK1H3BQV0 150 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 UGT2B15P54855 530 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 RPP38P78345 283 aaKnown RBP14.93□□□□□ -0.02
SHOX-201ENST00000334060 EGR4Q05215 589 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 MERTKQ12866 999 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 EXOC3L2Q2M3D2 409 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 ZNF550Q7Z398 422 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 ATG4DQ86TL0 474 aaPredicted RBP14.93□□□□□ -0.02
SHOX-201ENST00000334060 ADGRG3Q86Y34 549 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 EPHX4Q8IUS5 362 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 MISPQ8IVT2 679 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 SLC7A13Q8TCU3 470 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 PIP5K1AQ99755 562 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 KLHL4Q9C0H6 718 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 AGPAT4Q9NRZ5 378 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 C20orf141Q9NUB4 165 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms