RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 TRAV1-2A0A0B4J238 106 aa21.85■■□□□ 1.09
TSKU-201ENST00000333090 TFP02787 698 aa21.85■■□□□ 1.09
TSKU-201ENST00000333090 ADH5P11766 374 aa21.85■■□□□ 1.09
TSKU-201ENST00000333090 ELAVL3Q14576 367 aaKnown RBP21.85■■□□□ 1.09
TSKU-201ENST00000333090 OPCMLQ14982 345 aa21.85■■□□□ 1.09
TSKU-201ENST00000333090 OR1Q1Q15612 314 aa21.85■■□□□ 1.09
TSKU-201ENST00000333090 MAPK14Q16539 360 aa21.85■■□□□ 1.09
TSKU-201ENST00000333090 ADAMTSL4Q6UY14 1074 aa21.85■■□□□ 1.09
TSKU-201ENST00000333090 OR4C6Q8NH72 309 aa21.85■■□□□ 1.09
TSKU-201ENST00000333090 BPIFA2Q96DR5 249 aa21.85■■□□□ 1.09
TSKU-201ENST00000333090 C12orf4Q9NQ89 552 aa21.85■■□□□ 1.09
TSKU-201ENST00000333090 APOBEC3BQ9UH17 382 aaKnown RBP21.85■■□□□ 1.09
TSKU-201ENST00000333090 ST6GALNAC2Q9UJ37 374 aa21.85■■□□□ 1.09
TSKU-201ENST00000333090 POMT2Q9UKY4 750 aa21.85■■□□□ 1.09
TSKU-201ENST00000333090 SLC35A3Q9Y2D2 325 aa21.85■■□□□ 1.09
TSKU-201ENST00000333090 ACSM4P0C7M7 580 aa21.84■■□□□ 1.09
TSKU-201ENST00000333090 DDX6P26196 483 aaKnown RBP eCLIP21.84■■□□□ 1.09
TSKU-201ENST00000333090 BTN3A2P78410 334 aa21.84■■□□□ 1.09
TSKU-201ENST00000333090 DUSP5Q16690 384 aa21.84■■□□□ 1.09
TSKU-201ENST00000333090 IQCF2Q8IXL9 164 aa21.84■■□□□ 1.09
TSKU-201ENST00000333090 TRIM43Q96BQ3 446 aaPredicted RBP21.84■■□□□ 1.09
TSKU-201ENST00000333090 MS4A4EQ96PG1 132 aa21.84■■□□□ 1.09
TSKU-201ENST00000333090 DERL3Q96Q80 235 aa21.84■■□□□ 1.09
TSKU-201ENST00000333090 OR14A2Q96R54 314 aa21.84■■□□□ 1.09
TSKU-201ENST00000333090 OR1A2Q9Y585 309 aa21.84■■□□□ 1.09
TSKU-201ENST00000333090 KHNYNO15037 678 aaKnown RBP21.84■■□□□ 1.09
TSKU-201ENST00000333090 GSTZ1O43708 216 aaPredicted RBP21.84■■□□□ 1.09
TSKU-201ENST00000333090 ASGR2P07307 311 aa21.84■■□□□ 1.09
TSKU-201ENST00000333090 BMP8BP34820 402 aa21.84■■□□□ 1.09
TSKU-201ENST00000333090 GDI2P50395 445 aaKnown RBP21.84■■□□□ 1.09
TSKU-201ENST00000333090 MAP2K6P52564 334 aa21.84■■□□□ 1.09
TSKU-201ENST00000333090 EEF1A1P68104 462 aaKnown RBP21.84■■□□□ 1.09
TSKU-201ENST00000333090 TMEM52BQ4KMG9 183 aa21.84■■□□□ 1.09
TSKU-201ENST00000333090 DGLUCYQ7Z3D6 616 aa21.84■■□□□ 1.09
TSKU-201ENST00000333090 BMP8AQ7Z5Y6 402 aa21.84■■□□□ 1.09
TSKU-201ENST00000333090 CDK20Q8IZL9 346 aa21.84■■□□□ 1.09
TSKU-201ENST00000333090 CMTM4Q8IZR5 234 aa21.84■■□□□ 1.09
TSKU-201ENST00000333090 ARL14Q8N4G2 192 aa21.84■■□□□ 1.09
TSKU-201ENST00000333090 NPIPA5A0A0B4J1W7 369 aa21.83■■□□□ 1.09
TSKU-201ENST00000333090 NPIPA7E9PJI5 369 aa21.83■■□□□ 1.09
TSKU-201ENST00000333090 RGS11O94810 467 aa21.83■■□□□ 1.09
TSKU-201ENST00000333090 PPP1R3DO95685 299 aa21.83■■□□□ 1.09
TSKU-201ENST00000333090 SERPINA3P01011 423 aa21.83■■□□□ 1.09
TSKU-201ENST00000333090 GNRH1P01148 92 aa21.83■■□□□ 1.09
TSKU-201ENST00000333090 NPIPA8P0DM63 369 aa21.83■■□□□ 1.09
TSKU-201ENST00000333090 PPM1AP35813 382 aa21.83■■□□□ 1.09
TSKU-201ENST00000333090 CCR9P51686 369 aa21.83■■□□□ 1.09
TSKU-201ENST00000333090 EIPR1Q53HC9 387 aa21.83■■□□□ 1.09
TSKU-201ENST00000333090 HMGB4Q8WW32 186 aa21.83■■□□□ 1.09
TSKU-201ENST00000333090 SFXN2Q96NB2 322 aa21.83■■□□□ 1.09
TSKU-201ENST00000333090 SEC22CQ9BRL7 303 aa21.83■■□□□ 1.09
TSKU-201ENST00000333090 HRASLSQ9HDD0 168 aa21.83■■□□□ 1.09
TSKU-201ENST00000333090 KCNK6Q9Y257 313 aa21.83■■□□□ 1.09
TSKU-201ENST00000333090 SIGLEC7Q9Y286 467 aa21.83■■□□□ 1.09
TSKU-201ENST00000333090 SPTBN5Q9NRC6 3674 aaKnown RBP21.83■■□□□ 1.09
TSKU-201ENST00000333090 IGLON5A6NGN9 336 aa21.83■■□□□ 1.08
TSKU-201ENST00000333090 OR52A4PA6NMU1 304 aa21.83■■□□□ 1.08
TSKU-201ENST00000333090 ARL6IP5O75915 188 aa21.83■■□□□ 1.08
TSKU-201ENST00000333090 ZNF3P17036 446 aa21.83■■□□□ 1.08
TSKU-201ENST00000333090 PSMB1P20618 241 aaKnown RBP21.83■■□□□ 1.08
TSKU-201ENST00000333090 NT5EP21589 574 aa21.83■■□□□ 1.08
TSKU-201ENST00000333090 MRPL2Q5T653 305 aaKnown RBP21.83■■□□□ 1.08
TSKU-201ENST00000333090 SLC25A25Q6KCM7 469 aa21.83■■□□□ 1.08
TSKU-201ENST00000333090 KCTD20Q7Z5Y7 419 aa21.83■■□□□ 1.08
TSKU-201ENST00000333090 NRROSQ86YC3 692 aa21.83■■□□□ 1.08
TSKU-201ENST00000333090 OR4N5Q8IXE1 308 aa21.83■■□□□ 1.08
TSKU-201ENST00000333090 ORAI1Q96D31 301 aa21.83■■□□□ 1.08
TSKU-201ENST00000333090 ELMOD3Q96FG2 381 aa21.83■■□□□ 1.08
TSKU-201ENST00000333090 PPA2Q9H2U2 334 aa21.83■■□□□ 1.08
TSKU-201ENST00000333090 CCDC86Q9H6F5 360 aaKnown RBP21.83■■□□□ 1.08
TSKU-201ENST00000333090 MGAT4CQ9UBM8 478 aa21.83■■□□□ 1.08
TSKU-201ENST00000333090 NOTCH4Q99466 2003 aa21.82■■□□□ 1.08
TSKU-201ENST00000333090 EDDM13A0A1B0GTR0 161 aa21.82■■□□□ 1.08
TSKU-201ENST00000333090 TRIM77I1YAP6 450 aa21.82■■□□□ 1.08
TSKU-201ENST00000333090 ARPC1BO15143 372 aaKnown RBP21.82■■□□□ 1.08
TSKU-201ENST00000333090 P2RY2P41231 377 aa21.82■■□□□ 1.08
TSKU-201ENST00000333090 VASPP50552 380 aaPredicted RBP21.82■■□□□ 1.08
TSKU-201ENST00000333090 CEBPEQ15744 281 aa21.82■■□□□ 1.08
TSKU-201ENST00000333090 GARNL3Q5VVW2 1013 aa21.82■■□□□ 1.08
TSKU-201ENST00000333090 BAIAP2L2Q6UXY1 529 aa21.82■■□□□ 1.08
TSKU-201ENST00000333090 SFTPA1Q8IWL2 248 aa21.82■■□□□ 1.08
TSKU-201ENST00000333090 WFIKKN2Q8TEU8 576 aa21.82■■□□□ 1.08
TSKU-201ENST00000333090 OTUB2Q96DC9 234 aa21.82■■□□□ 1.08
TSKU-201ENST00000333090 LRRC3BQ96PB8 259 aa21.82■■□□□ 1.08
TSKU-201ENST00000333090 SDF2Q99470 211 aa21.82■■□□□ 1.08
TSKU-201ENST00000333090 TRPM6Q9BX84 2022 aa21.82■■□□□ 1.08
TSKU-201ENST00000333090 TGM6O95932 706 aa21.82■■□□□ 1.08
TSKU-201ENST00000333090 LAMP2P13473 410 aa21.82■■□□□ 1.08
TSKU-201ENST00000333090 SLC2A5P22732 501 aa21.82■■□□□ 1.08
TSKU-201ENST00000333090 KIAA1324Q6UXG2 1013 aaKnown RBP21.82■■□□□ 1.08
TSKU-201ENST00000333090 RNF113BQ8IZP6 322 aaKnown RBP21.82■■□□□ 1.08
TSKU-201ENST00000333090 FAM98AQ8NCA5 519 aaKnown RBP21.82■■□□□ 1.08
TSKU-201ENST00000333090 ZMYND19Q96E35 227 aaPredicted RBP21.82■■□□□ 1.08
TSKU-201ENST00000333090 CFHR5Q9BXR6 569 aa21.82■■□□□ 1.08
TSKU-201ENST00000333090 USP36Q9P275 1121 aaKnown RBP21.82■■□□□ 1.08
TSKU-201ENST00000333090 TBC1D3KA0A087X1G2 549 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.81■■□□□ 1.08
TSKU-201ENST00000333090 hCG_1807616A0A1W2PRN6 198 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 TBC1D3BA6NDS4 549 aa21.81■■□□□ 1.08
TSKU-201ENST00000333090 TBC1D3FA6NER0 549 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms