RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 A0A0G2JND7 137 aa24.67■■□□□ 1.54
ATPAF1-201ENST00000329231 A0A1W2PNR3 127 aa24.67■■□□□ 1.54
ATPAF1-201ENST00000329231 VIMP08670 466 aaKnown RBP24.67■■□□□ 1.54
ATPAF1-201ENST00000329231 TROVE2P10155 538 aaKnown RBP eCLIP24.67■■□□□ 1.544e-8■■■■■ 72
ATPAF1-201ENST00000329231 LRIF1Q5T3J3 769 aa24.67■■□□□ 1.54
ATPAF1-201ENST00000329231 MRPL2Q5T653 305 aaKnown RBP24.67■■□□□ 1.54
ATPAF1-201ENST00000329231 FBXW10Q5XX13 1052 aa24.67■■□□□ 1.54
ATPAF1-201ENST00000329231 SLC43A2Q8N370 569 aa24.67■■□□□ 1.54
ATPAF1-201ENST00000329231 OR52P1PQ8NH57 321 aa24.67■■□□□ 1.54
ATPAF1-201ENST00000329231 OR5B2Q96R09 309 aa24.67■■□□□ 1.54
ATPAF1-201ENST00000329231 CACYBPQ9HB71 228 aaKnown RBP24.67■■□□□ 1.54
ATPAF1-201ENST00000329231 GP6Q9HCN6 339 aa24.67■■□□□ 1.54
ATPAF1-201ENST00000329231 SLC52A3Q9NQ40 469 aa24.67■■□□□ 1.54
ATPAF1-201ENST00000329231 POLQO75417 2590 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 DYNC1I1O14576 645 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 CASKO14936 926 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 PRKD3O94806 890 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 UQCRBP14927 111 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 HOXB9P17482 250 aaPredicted RBP24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 NCF2P19878 526 aaPredicted RBP24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 FKBP2P26885 142 aaKnown RBP24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 AGTR1P30556 359 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 UGT2B10P36537 528 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 HTR3AP46098 478 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 IDH2P48735 452 aaKnown RBP24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 LIN52Q52LA3 116 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 SYT14P1Q58G82 188 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 TMEM201Q5SNT2 666 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 STK32CQ86UX6 486 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 ZNF440Q8IYI8 595 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 ABHD3Q8WU67 409 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 TMEM19Q96HH6 336 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 FANCFQ9NPI8 374 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 CTPS2Q9NRF8 586 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 CHRNA9Q9UGM1 479 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 TACC2O95359 2948 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 CSMD2Q7Z408 3487 aa24.66■■□□□ 1.54
ATPAF1-201ENST00000329231 A0A0G2JPF8 293 aa24.65■■□□□ 1.54
ATPAF1-201ENST00000329231 HNRNPCL2B2RXH8 293 aa24.65■■□□□ 1.54
ATPAF1-201ENST00000329231 HNRNPCL3B7ZW38 293 aa24.65■■□□□ 1.54
ATPAF1-201ENST00000329231 C16orf97H3BN30 126 aa24.65■■□□□ 1.54
ATPAF1-201ENST00000329231 HNRNPCL1O60812 293 aaKnown RBP24.65■■□□□ 1.54
ATPAF1-201ENST00000329231 ADAM11O75078 769 aa24.65■■□□□ 1.54
ATPAF1-201ENST00000329231 HNRNPCL4P0DMR1 293 aa24.65■■□□□ 1.54
ATPAF1-201ENST00000329231 PPIBP23284 216 aaKnown RBP24.65■■□□□ 1.54
ATPAF1-201ENST00000329231 ZSWIM7Q19AV6 140 aa24.65■■□□□ 1.54
ATPAF1-201ENST00000329231 EXOC3L2Q2M3D2 409 aa24.65■■□□□ 1.54
ATPAF1-201ENST00000329231 PAGE3Q5JUK9 113 aa24.65■■□□□ 1.54
ATPAF1-201ENST00000329231 SLC25A37Q9NYZ2 338 aa24.65■■□□□ 1.54
ATPAF1-201ENST00000329231 KLHL13Q9P2N7 655 aa24.65■■□□□ 1.54
ATPAF1-201ENST00000329231 ITGB1BP2Q9UKP3 347 aa24.65■■□□□ 1.54
ATPAF1-201ENST00000329231 ZNF232Q9UNY5 417 aa24.65■■□□□ 1.54
ATPAF1-201ENST00000329231 TESMINQ9Y4I5 508 aa24.65■■□□□ 1.54
ATPAF1-201ENST00000329231 A0A1W2PP18 115 aa24.64■■□□□ 1.54
ATPAF1-201ENST00000329231 CFAP73A6NFT4 308 aa24.64■■□□□ 1.54
ATPAF1-201ENST00000329231 FAAHO00519 579 aa24.64■■□□□ 1.54
ATPAF1-201ENST00000329231 TFPIP10646 304 aa24.64■■□□□ 1.54
ATPAF1-201ENST00000329231 BMP2P12643 396 aa24.64■■□□□ 1.54
ATPAF1-201ENST00000329231 CSNK2A1P68400 391 aaPredicted RBP24.64■■□□□ 1.54
ATPAF1-201ENST00000329231 LARS2Q15031 903 aaKnown RBP24.64■■□□□ 1.54
ATPAF1-201ENST00000329231 PRAMEF8Q5VWM4 474 aa24.64■■□□□ 1.54
ATPAF1-201ENST00000329231 PRAMEF7Q5VXH5 474 aa24.64■■□□□ 1.54
ATPAF1-201ENST00000329231 TMPPEQ6ZT21 453 aa24.64■■□□□ 1.54
ATPAF1-201ENST00000329231 VRK2Q86Y07 508 aa24.64■■□□□ 1.54
ATPAF1-201ENST00000329231 TACO1Q9BSH4 297 aaKnown RBP24.64■■□□□ 1.54
ATPAF1-201ENST00000329231 TMEM120AQ9BXJ8 343 aa24.64■■□□□ 1.54
ATPAF1-201ENST00000329231 A4GALTQ9NPC4 353 aa24.64■■□□□ 1.54
ATPAF1-201ENST00000329231 SLAMF8Q9P0V8 285 aa24.64■■□□□ 1.54
ATPAF1-201ENST00000329231 PRDM4Q9UKN5 801 aa24.64■■□□□ 1.54
ATPAF1-201ENST00000329231 CDHR4A6H8M9 788 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 AP3D1O14617 1153 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 THBS1P07996 1170 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 ENPP1P22413 925 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 CLK1P49759 484 aaKnown RBP24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 DIO1P49895 249 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 EPS8Q12929 822 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 RPS26P11Q5JNZ5 115 aaPredicted RBP24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 METTL21CQ5VZV1 264 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 ZNF836Q6ZNA1 936 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 BEND4Q6ZU67 534 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 CDC20BQ86Y33 519 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 MSRB3Q8IXL7 192 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 WFIKKN1Q96NZ8 548 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 MED18Q9BUE0 208 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 ARMC7Q9H6L4 198 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 C12orf49Q9H741 205 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 RLIMQ9NVW2 624 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 KLHL9Q9P2J3 617 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 ZNF443Q9Y2A4 671 aaPredicted RBP24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 IFT52Q9Y366 437 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 GMEB1Q9Y692 573 aa24.63■■□□□ 1.53
ATPAF1-201ENST00000329231 SULT2B1O00204 365 aa24.62■■□□□ 1.53
ATPAF1-201ENST00000329231 YES1P07947 543 aa24.62■■□□□ 1.53
ATPAF1-201ENST00000329231 NUDT7P0C024 238 aa24.62■■□□□ 1.53
ATPAF1-201ENST00000329231 SLC1A3P43003 542 aa24.62■■□□□ 1.53
ATPAF1-201ENST00000329231 POLR2HP52434 150 aaKnown RBP24.62■■□□□ 1.53
ATPAF1-201ENST00000329231 RNF220Q5VTB9 566 aa24.62■■□□□ 1.53
ATPAF1-201ENST00000329231 CGB2Q6NT52 195 aa24.62■■□□□ 1.53
ATPAF1-201ENST00000329231 ADGRG3Q86Y34 549 aa24.62■■□□□ 1.53
ATPAF1-201ENST00000329231 TUSC5Q8IXB3 177 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms