RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 PLCXD3Q63HM9 321 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 DCAF4L2Q8NA75 395 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 ZFP57Q9NU63 452 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 SDHAF2Q9NX18 166 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 BABAM2Q9NXR7 383 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 CEBPZOSA8MTT3 80 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 DVL1O14640 695 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 ONECUT3O60422 494 aaPredicted RBP7.43□□□□□ -1.22
CIITA-201ENST00000324288 DVL1P1P54792 670 aaPredicted RBP7.43□□□□□ -1.22
CIITA-201ENST00000324288 EMX1Q04741 257 aaPredicted RBP7.43□□□□□ -1.22
CIITA-201ENST00000324288 OR2G6Q5TZ20 316 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 KCNIP4Q6PIL6 250 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 OR4K15Q8NH41 348 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 DVL3Q92997 716 aaPredicted RBP7.43□□□□□ -1.22
CIITA-201ENST00000324288 SFXN2Q96NB2 322 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 CNTNAP3Q9BZ76 1288 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.42□□□□□ -1.22
CIITA-201ENST00000324288 FANCGO15287 622 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 DNAJB5O75953 348 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 DHRS4L1P0CG22 281 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 PIN1Q13526 163 aaPredicted RBP7.42□□□□□ -1.22
CIITA-201ENST00000324288 PIP5KL1Q5T9C9 394 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 CLEC9AQ6UXN8 241 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 BPIFB2Q8N4F0 458 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 TXN2Q99757 166 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 PCDHB10Q9UN67 800 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 OSGIN2Q9Y236 505 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 H7C1Q1 480 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 C21orf33P30042 268 aaPredicted RBP7.42□□□□□ -1.22
CIITA-201ENST00000324288 ERVFC1P60507 584 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 RPS15AP62244 130 aaKnown RBP7.42□□□□□ -1.22
CIITA-201ENST00000324288 PLEKHS1Q5SXH7 462 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 TSPYL5Q86VY4 417 aaPredicted RBP7.42□□□□□ -1.22
CIITA-201ENST00000324288 GIMAP1Q8WWP7 306 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 HOXD13P35453 343 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 GRB2P62993 217 aaKnown RBP7.42□□□□□ -1.22
CIITA-201ENST00000324288 CMPK2Q5EBM0 449 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 TMEM268Q5VZI3 342 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 KIAA0895LQ68EN5 471 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 ZNF775Q96BV0 537 aaPredicted RBP7.42□□□□□ -1.22
CIITA-201ENST00000324288 TMEM231Q9H6L2 316 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 ENSAO43768 121 aaKnown RBP7.42□□□□□ -1.22
CIITA-201ENST00000324288 PDGFAP04085 211 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 T-ENOLP0DO92 83 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 DUSP7Q16829 419 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 LRRC18Q8N456 261 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 OR8J2Q8NGG1 315 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 HSD17B8Q92506 261 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 OLAHQ9NV23 265 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 CPNE7Q9UBL6 633 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 RIMS3Q9UJD0 308 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 FREM1Q5H8C1 2179 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 AQP9O43315 295 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 HAPLN1P10915 354 aaPredicted RBP7.42□□□□□ -1.22
CIITA-201ENST00000324288 RBMS1P29558 406 aaKnown RBP7.42□□□□□ -1.22
CIITA-201ENST00000324288 SF3B4Q15427 424 aaKnown RBP eCLIP7.42□□□□□ -1.22
CIITA-201ENST00000324288 PSAPL1Q6NUJ1 521 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 TMEM175Q9BSA9 504 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 GPR88Q9GZN0 384 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 TUBB1Q9H4B7 451 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 RARRES3Q9UL19 164 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 ZNF44P15621 663 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 FECHP22830 423 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 APLNRP35414 380 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 SRP9P49458 86 aaKnown RBP7.42□□□□□ -1.22
CIITA-201ENST00000324288 GRM7Q14831 915 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 TESK1Q15569 626 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 NXPE4Q6UWF7 544 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 GLCCI1Q86VQ1 547 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 DENND1AQ8TEH3 1009 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 DAZLQ92904 295 aaKnown RBP7.42□□□□□ -1.22
CIITA-201ENST00000324288 FAM103A1Q9BTL3 118 aaKnown RBP7.42□□□□□ -1.22
CIITA-201ENST00000324288 NXF2Q9GZY0 626 aaKnown RBP7.42□□□□□ -1.22
CIITA-201ENST00000324288 DBHP09172 617 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 PPP3CBP16298 524 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 DDCP20711 480 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 MC3RP41968 323 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 TPMTP51580 245 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 RPS15P62841 145 aaKnown RBP7.42□□□□□ -1.22
CIITA-201ENST00000324288 PAGE3Q5JUK9 113 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 FCRL1Q96LA6 429 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 ZNF582Q96NG8 517 aaPredicted RBP7.42□□□□□ -1.22
CIITA-201ENST00000324288 NUDT22Q9BRQ3 303 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 EFCAB7A8K855 629 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 EPHA4P54764 986 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 CLDN2P57739 230 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 TAP2Q03519 686 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 GPR50Q13585 617 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 OR7A5Q15622 319 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 SHEQ5VZ18 495 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 TSSK4Q6SA08 328 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 ST8SIA4Q92187 359 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 MUL1Q969V5 352 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 C4orf36Q96KX1 117 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 EGLN3Q9H6Z9 239 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 ZNF355PQ9NSJ1 428 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 KLHL42Q9P2K6 505 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 LGALS8O00214 317 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 HTR6P50406 440 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 ETV1P50549 477 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms