RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 DEFB110Q30KQ9 67 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 ALG10BQ5I7T1 473 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 SSX6Q7RTT6 188 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 FRMD1Q8N878 549 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 Q8N9G6 341 aaPredicted RBP12.68□□□□□ -0.38
ATG4C-201ENST00000317868 C17orf47Q8NEP4 570 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 OR10H4Q8NGA5 316 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 SMPDL3BQ92485 455 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 NACC2Q96BF6 587 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 FRMD6Q96NE9 622 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 TBX5Q99593 518 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 CCDC3Q9BQI4 270 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 TTYH2Q9BSA4 534 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 CHRDQ9H2X0 955 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 TP63Q9H3D4 680 aaPredicted RBP12.68□□□□□ -0.38
ATG4C-201ENST00000317868 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.68□□□□□ -0.38
ATG4C-201ENST00000317868 NOX1Q9Y5S8 564 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 CTNSO60931 367 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 CD1AP06126 327 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 CT45A8P0DMV1 189 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 CT45A9P0DMV2 189 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 RFX3P48380 749 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 CLDN20P56880 219 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 FUT7Q11130 342 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 GAS6Q14393 721 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 SF3A2Q15428 464 aaKnown RBP12.68□□□□□ -0.38
ATG4C-201ENST00000317868 KLHL12Q53G59 568 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 CT45A2Q5DJT8 189 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 ULK3Q6PHR2 472 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 ZC3H14Q6PJT7 736 aaKnown RBP12.68□□□□□ -0.38
ATG4C-201ENST00000317868 KIRREL2Q6UWL6 708 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 OAFQ86UD1 273 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 LRRC28Q86X40 367 aaPredicted RBP12.68□□□□□ -0.38
ATG4C-201ENST00000317868 FAM71CQ8NEG0 241 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 OR51A7Q8NH64 312 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 OR4C6Q8NH72 309 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 RPS4Y2Q8TD47 263 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 ZDHHC1Q8WTX9 485 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 C4orf36Q96KX1 117 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 NECTIN4Q96NY8 510 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 MFRPQ9BY79 579 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 ZCCHC4Q9H5U6 513 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 TFP02787 698 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 SHC1P29353 583 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 RPS4XP62701 263 aaKnown RBP12.68□□□□□ -0.38
ATG4C-201ENST00000317868 TBRG1Q3YBR2 411 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 ZNF542PQ5EBM4 170 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 FCRLBQ6BAA4 426 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 ZNF550Q7Z398 422 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 TAF8Q7Z7C8 310 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 MCATQ8IVS2 390 aaKnown RBP12.68□□□□□ -0.38
ATG4C-201ENST00000317868 ZNF595Q8IYB9 648 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 AVL9Q8NBF6 648 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 RCBTB1Q8NDN9 531 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 ADAMTS18Q8TE60 1221 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 HMGB4Q8WW32 186 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 RIT1Q92963 219 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 TRIM63Q969Q1 353 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 OTULINQ96BN8 352 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 LRRC61Q9BV99 259 aa12.68□□□□□ -0.38
ATG4C-201ENST00000317868 CPAMD8Q8IZJ3 1885 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 OGG1O15527 345 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 LYRM1O43325 122 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 OR10H2O60403 315 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 SRPX2O60687 465 aaPredicted RBP12.67□□□□□ -0.38
ATG4C-201ENST00000317868 THEGLP0DJG4 465 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 RNH1P13489 461 aaKnown RBP12.67□□□□□ -0.38
ATG4C-201ENST00000317868 ATP12AP54707 1039 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 SRSF5Q13243 272 aaKnown RBP12.67□□□□□ -0.38
ATG4C-201ENST00000317868 IL18Q14116 193 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 ZNHIT3Q15649 155 aaPredicted RBP12.67□□□□□ -0.38
ATG4C-201ENST00000317868 RFLNBQ8N5W9 214 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 ABHD4Q8TB40 342 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 ZNF578Q96N58 590 aaPredicted RBP12.67□□□□□ -0.38
ATG4C-201ENST00000317868 MARVELD1Q9BSK0 173 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 SLCO1B1Q9Y6L6 691 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 A0A087WUJ7 227 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 EFCAB7A8K855 629 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 TFECO14948 347 aaPredicted RBP12.67□□□□□ -0.38
ATG4C-201ENST00000317868 HYAL3O43820 417 aaPredicted RBP12.67□□□□□ -0.38
ATG4C-201ENST00000317868 TRIM3O75382 744 aaPredicted RBP12.67□□□□□ -0.38
ATG4C-201ENST00000317868 NSA2O95478 260 aaKnown RBP12.67□□□□□ -0.38
ATG4C-201ENST00000317868 IGF2P01344 180 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 GLULP15104 373 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 GALNSP34059 522 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 OR12D2P58182 307 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.67□□□□□ -0.38
ATG4C-201ENST00000317868 ISXQ2M1V0 245 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 FNDC7Q5VTL7 733 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 TRIQKQ629K1 86 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 SFXN4Q6P4A7 337 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 SYS1Q8N2H4 156 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 ZNF615Q8N8J6 731 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 OR5J2Q8NH18 312 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 GPX7Q96SL4 187 aaPredicted RBP12.67□□□□□ -0.38
ATG4C-201ENST00000317868 OR51V1Q9H2C8 321 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 UCK1Q9HA47 277 aa12.67□□□□□ -0.38
ATG4C-201ENST00000317868 RBMX2Q9Y388 322 aaKnown RBP12.67□□□□□ -0.38
ATG4C-201ENST00000317868 SPTBP11277 2137 aa12.66□□□□□ -0.38
ATG4C-201ENST00000317868 A0A0A6YYC8 382 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms