RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 LCN8Q6JVE9 175 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 FKBP9P1Q75LS8 142 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 YTHDF3Q7Z739 585 aaKnown RBP16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 CARM1Q86X55 608 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 LILRA2Q8N149 483 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 FAM156AQ8NDB6 213 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 DDIT4LQ96D03 193 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 SLC47A1Q96FL8 570 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 LRGUKQ96M69 825 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 KLHL15Q96M94 604 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 MCHR1Q99705 422 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 CAMK2AQ9UQM7 478 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 OSGIN2Q9Y236 505 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 HDGFL3Q9Y3E1 203 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 POLEQ07864 2286 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 E9PLN8 166 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 M0R3H8 397 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 GSC2O15499 205 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 FRS3O43559 492 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 NCK1P16333 377 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 ITGA2P17301 1181 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 GNLYP22749 145 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 TCEA1P23193 301 aaKnown RBP16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 ACVR2AP27037 513 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 TACR3P29371 465 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 MRPL49Q13405 166 aaKnown RBP16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 SYT14P1Q58G82 188 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 PGM2L1Q6PCE3 622 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 ULK2Q8IYT8 1036 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 OR6T1Q8NGN1 323 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 RELTQ969Z4 430 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 HSH2DQ96JZ2 352 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 UCN2Q96RP3 112 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 VKORC1Q9BQB6 163 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 CALHM2Q9HA72 323 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 GMPR2Q9P2T1 348 aaKnown RBP16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 OSGIN1Q9UJX0 560 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 PACSIN3Q9UKS6 424 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 SHANK1Q9Y566 2161 aa16.14■□□□□ 0.17
SSSCA1-201ENST00000309328 TMED7-TICAM2A0A0A6YYA0 188 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 A0A0B4J2E0 115 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 TRGV8A0A0C4DH27 118 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 A0A1B0GX12 115 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 TRAPPC13A5PLN9 417 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 DNPH1O43598 174 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 PDE5AO76074 875 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 WISP2O76076 250 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 OR5F1O95221 314 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 FCGR2AP12318 317 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 PER3P56645 1201 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 CSNK2A1P68400 391 aaPredicted RBP16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 OR1Q1Q15612 314 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 C4orf17Q53FE4 359 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 ALG10BQ5I7T1 473 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 B3GNT6Q6ZMB0 384 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 COMTD1Q86VU5 262 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 CYP4Z1Q86W10 505 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 DOLPP1Q86YN1 238 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 OR5M1Q8NGP8 315 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 PHF10Q8WUB8 498 aaKnown RBP16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 C3orf49Q96BT1 292 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 CCDC124Q96CT7 223 aaKnown RBP16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 PYURFQ96I23 114 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 MPP4Q96JB8 637 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 RSPO3Q9BXY4 272 aaPredicted RBP16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 CTPS2Q9NRF8 586 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 PNPLA3Q9NST1 481 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 TMED7Q9Y3B3 224 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 ZNF175Q9Y473 711 aa16.13■□□□□ 0.17
SSSCA1-201ENST00000309328 NBASA2RRP1 2371 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 A0A1B0GWA3 101 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 CD8B2A6NJW9 211 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 ELOA3DA6NLF2 546 aaPredicted RBP16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 AQP12BA6NM10 295 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 A8MVM7 634 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 TMEM229AB2RXF0 380 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 SHISA8B8ZZ34 492 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 CHP2O43745 196 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 HTR2AP28223 471 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 TAS2R41P59536 307 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 C3AR1Q16581 482 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 EIF2S3LQ2VIR3 472 aaKnown RBP16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 ELOA3BQ3SY89 546 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 EMC4Q5J8M3 183 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 ENTPD8Q5MY95 495 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 DCST1Q5T197 706 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 C1orf185Q5T7R7 199 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 ZNF585AQ6P3V2 769 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 ATG4DQ86TL0 474 aaPredicted RBP16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 GGNQ86UU5 652 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 ADGRG3Q86Y34 549 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 LACC1Q8IV20 430 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 AQP12AQ8IXF9 295 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 ELOA3Q8NG57 546 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 OR2V1Q8NHB1 315 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 VANGL1Q8TAA9 524 aaPredicted RBP16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 PRR7Q8TB68 274 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 STK35Q8TDR2 534 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 ADAMTS16Q8TE57 1224 aa16.12■□□□□ 0.17
SSSCA1-201ENST00000309328 SMPDL3BQ92485 455 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms