RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 COPZ1P61923 177 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 LSM3P62310 102 aaKnown RBP4.54□□□□□ -1.68
CAST-201ENST00000309190 DGCR6Q14129 220 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 FAM71E1Q6IPT2 247 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 KIRREL2Q6UWL6 708 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 SERPINA11Q86U17 422 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 PTOV1Q86YD1 416 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 ZDHHC21Q8IVQ6 265 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 CISD2Q8N5K1 135 aaKnown RBP4.54□□□□□ -1.68
CAST-201ENST00000309190 CLDN22Q8N7P3 220 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 TTLQ8NG68 377 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 OR4D9Q8NGE8 314 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 SDCCAG3Q96C92 435 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 ZC3H10Q96K80 434 aaKnown RBP4.54□□□□□ -1.68
CAST-201ENST00000309190 USB1Q9BQ65 265 aaKnown RBP4.54□□□□□ -1.68
CAST-201ENST00000309190 ZNF717Q9BY31 904 aaPredicted RBP4.54□□□□□ -1.68
CAST-201ENST00000309190 PRRG4Q9BZD6 226 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 Q9N2J8 555 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 THSD1Q9NS62 852 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 SACM1LQ9NTJ5 587 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 POU2F3Q9UKI9 436 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 TCFL5Q9UL49 500 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 CSMD1Q96PZ7 3565 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 ZNF891A8MT65 544 aaPredicted RBP4.54□□□□□ -1.68
CAST-201ENST00000309190 MAGEB4O15481 346 aaPredicted RBP4.54□□□□□ -1.68
CAST-201ENST00000309190 OIP5O43482 229 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 PRICKLE3O43900 615 aaPredicted RBP4.54□□□□□ -1.68
CAST-201ENST00000309190 SSX4O60224 188 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 ICOSLGO75144 302 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 TDGF1P13385 188 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 FASP25445 335 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 SCAND1P57086 179 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 SKP1P63208 163 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 VLDLRP98155 873 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 PRKCDQ05655 676 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 C19orf57Q0VDD7 668 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 ZNF79Q15937 498 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 METAP1DQ6UB28 335 aaPredicted RBP4.54□□□□□ -1.68
CAST-201ENST00000309190 RPS19BP1Q86WX3 136 aaKnown RBP4.54□□□□□ -1.68
CAST-201ENST00000309190 FAM9CQ8IZT9 166 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 CYP4Z2PQ8N1L4 340 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 LRRC17Q8N6Y2 441 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 OR52P1PQ8NH57 321 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 FLVCR1-AS1Q8TAF5 88 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 ZFPM2Q8WW38 1151 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 ASB15Q8WXK1 588 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 NKX3-1Q99801 234 aaPredicted RBP4.54□□□□□ -1.68
CAST-201ENST00000309190 RTN4RQ9BZR6 473 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 GPATCH2Q9NW75 528 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 HPF1Q9NWY4 346 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 GPR83Q9NYM4 423 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 SEC14L4Q9UDX3 406 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 PHF11Q9UIL8 331 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 SRPK3Q9UPE1 567 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 SLC22A7Q9Y694 548 aa4.54□□□□□ -1.68
CAST-201ENST00000309190 ATRQ13535 2644 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 CHRM4P08173 479 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 OCM2P0CE71 109 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 OCMP0CE72 109 aaPredicted RBP4.53□□□□□ -1.68
CAST-201ENST00000309190 GAAP10253 952 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 LIFP15018 202 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 AHRP35869 848 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 SIRPAP78324 504 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 NCF4Q15080 339 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 MRPL2Q5T653 305 aaKnown RBP4.53□□□□□ -1.68
CAST-201ENST00000309190 STEAP3Q658P3 488 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 METTL2BQ6P1Q9 378 aaKnown RBP4.53□□□□□ -1.68
CAST-201ENST00000309190 TUBA3EQ6PEY2 450 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 ARSKQ6UWY0 536 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 VASH1Q7L8A9 365 aaPredicted RBP4.53□□□□□ -1.68
CAST-201ENST00000309190 CCDC103Q8IW40 242 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 SLITRK4Q8IW52 837 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 LAS2Q8IYD9 372 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 SVOPLQ8N434 492 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 OR6T1Q8NGN1 323 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 SLC47A1Q96FL8 570 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 ZNF649Q9BS31 505 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 FNDC11Q9BVV2 318 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 PELI2Q9HAT8 420 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 WASH6PQ9NQA3 447 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 TOR4AQ9NXH8 423 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 DNAJC27Q9NZQ0 273 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 CCDC59Q9P031 241 aaKnown RBP4.53□□□□□ -1.68
CAST-201ENST00000309190 NFKBIL1Q9UBC1 381 aaPredicted RBP4.53□□□□□ -1.68
CAST-201ENST00000309190 PCDHGA6Q9Y5G7 932 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 TRAV27A0A087WT01 109 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 A0A0G2JMM0 328 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 A0A0X1KG70 313 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 A0A1W2PPB8 328 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 A0A1W2PRS3 328 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 ISPDA4D126 451 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 BLACEA4D250 179 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 LILRA5A6NI73 299 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 KIR3DP1A8MWS1 328 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 CLDN25C9JDP6 229 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 PCDH17O14917 1159 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 SEMA7AO75326 666 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 VPS4BO75351 444 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 KDELR2P33947 212 aa4.53□□□□□ -1.68
CAST-201ENST00000309190 LIPAP38571 399 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms