RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 TESQ9UGI8 421 aaKnown RBP18.03■□□□□ 0.48
USP48-201ENST00000308271 P2RX6O15547 441 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 PRDX1Q06830 199 aaKnown RBP18.03■□□□□ 0.48
USP48-201ENST00000308271 ZNF616Q08AN1 781 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.03■□□□□ 0.481e-9■■■□□ 17.2
USP48-201ENST00000308271 CSNK1A1LQ8N752 337 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 DDOQ99489 341 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 CDC6Q99741 560 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 SGIP1Q9BQI5 828 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 SDHAF2Q9NX18 166 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 SULT1B1O43704 296 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 HLA-FP30511 346 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 PRKAR1BP31321 381 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 ALG10Q5BKT4 473 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 CLVS2Q5SYC1 327 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 ZER1Q7Z7L7 766 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 UBQLN3Q9H347 655 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 GLI3P10071 1580 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 HSPA12AO43301 675 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 LCMT2O60294 686 aaKnown RBP18.02■□□□□ 0.48
USP48-201ENST00000308271 IGLV3-27P01718 113 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 INHBBP09529 407 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 KIAA1024LP59773 190 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 SLC7A9P82251 487 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 SHC2P98077 582 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 TCTN3Q6NUS6 607 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 PARS2Q7L3T8 475 aaKnown RBP18.02■□□□□ 0.48
USP48-201ENST00000308271 C12orf40Q86WS4 652 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 OR13C2Q8NGS9 318 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 A0A0A6YYJ9 748 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 RHPN2P1A8MT19 583 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 ADAM12O43184 909 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 ITGB7P26010 798 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 FABP5Q01469 135 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 TOR2AQ5JU69 321 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 TAS1R1Q7RTX1 841 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 PRICKLE2Q7Z3G6 844 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 DUSP19Q8WTR2 217 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 FOXJ1Q92949 421 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 C16orf58Q96GQ5 468 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 TCEAL7Q9BRU2 100 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 GLIPR2Q9H4G4 154 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 INSL6Q9Y581 213 aa18.02■□□□□ 0.48
USP48-201ENST00000308271 TGM4P49221 684 aa18.02■□□□□ 0.47
USP48-201ENST00000308271 ZBTB37Q5TC79 503 aa18.02■□□□□ 0.47
USP48-201ENST00000308271 BOLLQ8N9W6 283 aaKnown RBP18.02■□□□□ 0.47
USP48-201ENST00000308271 LMNTD1Q8N9Z9 388 aa18.02■□□□□ 0.47
USP48-201ENST00000308271 FAM83CQ9BQN1 747 aa18.02■□□□□ 0.47
USP48-201ENST00000308271 SRP9P49458 86 aaKnown RBP18.01■□□□□ 0.47
USP48-201ENST00000308271 OC90Q02509 493 aaPredicted RBP18.01■□□□□ 0.47
USP48-201ENST00000308271 P2RY14Q15391 338 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 ARHGAP40Q5TG30 622 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 C18orf63Q68DL7 685 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 RNF165Q6ZSG1 346 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 TMEM234Q8WY98 164 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 AMDHD1Q96NU7 426 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 CASD1Q96PB1 797 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 UNKLQ9H9P5 680 aaKnown RBP18.01■□□□□ 0.47
USP48-201ENST00000308271 IL13RA1P78552 427 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 CCSMST1Q4G0I0 132 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 AVL9Q8NBF6 648 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 PLA2G15Q8NCC3 412 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 DNAAF1Q8NEP3 725 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 STEAP2Q8NFT2 490 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 FBXL2Q9UKC9 423 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 MEIS3P1A6NDR6 274 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 ACOD1A6NK06 481 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 TSPAN15O95858 294 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 ACRP10323 421 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 GABRB1P18505 474 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 CXADRP78310 365 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 SLC14A1Q13336 389 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 ZNF385BQ569K4 471 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 SSX6Q7RTT6 188 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 CLCC1Q96S66 551 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 MYADMQ96S97 322 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 CLSTN3Q9BQT9 956 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 LGI1O95970 557 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 GIPP09681 153 aaPredicted RBP18.01■□□□□ 0.47
USP48-201ENST00000308271 GNMTQ14749 295 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 FIGLAQ6QHK4 219 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 PXT1Q8NFP0 134 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 MAP6Q96JE9 813 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 C19orf43Q9BQ61 176 aa18.01■□□□□ 0.47
USP48-201ENST00000308271 NPIPA5A0A0B4J1W7 369 aa18■□□□□ 0.47
USP48-201ENST00000308271 A0A1W2PP55 124 aa18■□□□□ 0.47
USP48-201ENST00000308271 NPIPA7E9PJI5 369 aa18■□□□□ 0.47
USP48-201ENST00000308271 DSCR3O14972 297 aa18■□□□□ 0.47
USP48-201ENST00000308271 KIAA0355O15063 1070 aa18■□□□□ 0.47
USP48-201ENST00000308271 TP53P04637 393 aaPredicted RBP18■□□□□ 0.47
USP48-201ENST00000308271 NPIPA8P0DM63 369 aa18■□□□□ 0.47
USP48-201ENST00000308271 PNMTP11086 282 aa18■□□□□ 0.47
USP48-201ENST00000308271 HERV-K104P61576 105 aa18■□□□□ 0.47
USP48-201ENST00000308271 GXYLT1Q4G148 440 aa18■□□□□ 0.47
USP48-201ENST00000308271 CCNJQ5T5M9 372 aa18■□□□□ 0.47
USP48-201ENST00000308271 PRAMEF8Q5VWM4 474 aa18■□□□□ 0.47
USP48-201ENST00000308271 PRAMEF7Q5VXH5 474 aa18■□□□□ 0.47
USP48-201ENST00000308271 MAMDC2Q7Z304 686 aaPredicted RBP18■□□□□ 0.47
USP48-201ENST00000308271 EPHX3Q9H6B9 360 aa18■□□□□ 0.47
USP48-201ENST00000308271 TAAR2Q9P1P5 351 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms