RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 LYRM4Q9HD34 91 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 FBXL3Q9UKT7 428 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 ZGLP1P0C6A0 271 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 OSMP13725 252 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 NPR2P20594 1047 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 GABRR1P24046 479 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 SLC25A44Q96H78 314 aaPredicted RBP9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 YTHDF1Q9BYJ9 559 aaKnown RBP9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 ATG4BQ9Y4P1 393 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 LRRC42Q9Y546 428 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 NME7Q9Y5B8 376 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 TAPBPO15533 448 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 NPPBP16860 134 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 CNN3Q15417 329 aaKnown RBP9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 SF3A2Q15428 464 aaKnown RBP9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 CASTOR1Q8WTX7 329 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 HPS1Q92902 700 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 TCEAL3Q969E4 200 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 FAM46BQ96A09 425 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 EGLN2Q96KS0 407 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 LMF1Q96S06 567 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 PCED1AQ9H1Q7 454 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 PDFQ9HBH1 243 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 CCM2LQ9NUG4 571 aaPredicted RBP9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 FAM118AQ9NWS6 357 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 LUZP4Q9P127 313 aa9.96□□□□□ -0.82
SYNPO2-201ENST00000307142 TMED7-TICAM2A0A0A6YYA0 188 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 IGHV3-9P01782 118 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 STSP08842 583 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 TMEM207Q6UWW9 146 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 NDUFAF7Q7L592 441 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 SAMD12Q8N8I0 201 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 BAHD1Q8TBE0 780 aaPredicted RBP9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 KCNIP3Q9Y2W7 256 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 TMED7Q9Y3B3 224 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 CAPN3P20807 821 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 GGTA1PQ4G0N0 100 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 COQ5Q5HYK3 327 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 ASRGL1Q7L266 308 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 SERPINA11Q86U17 422 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 MICU1Q9BPX6 476 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 CLEC1BQ9P126 229 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 SPTY2D1-AS1A0A0U1RR47 76 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 CLDN25C9JDP6 229 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 RFC3P40938 356 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 MAP2K4P45985 399 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 ZBED5Q49AG3 693 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 ZNF707Q96C28 371 aaPredicted RBP9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 TESQ9UGI8 421 aaKnown RBP9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 ATP23Q9Y6H3 246 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 CSF2P04141 144 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 LILRA6Q6PI73 481 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 FAM57BQ71RH2 274 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 LSM14AQ8ND56 463 aaKnown RBP9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 SLC41A2Q96JW4 573 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 WACQ9BTA9 647 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 CHST8Q9H2A9 424 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 TCEAL2Q9H3H9 227 aaPredicted RBP9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 SMOXQ9NWM0 555 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 ZNF891A8MT65 544 aaPredicted RBP9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 RAB3AP20336 220 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 RNF220Q5VTB9 566 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 SLC6A19Q695T7 634 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 ABHD17CQ6PCB6 329 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 ZNF704Q6ZNC4 412 aaPredicted RBP9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 TRIM46Q7Z4K8 759 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 SDR39U1Q9NRG7 319 aaPredicted RBP9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 LOC105369274A0A096LPK9 316 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 OR14I1A6ND48 311 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 TVP23AA6NH52 213 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 OR2AT4A6NND4 320 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 CLCA1A8K7I4 914 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 AHCYL1O43865 530 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 GYPBP06028 91 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 PIGFQ07326 219 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 FAM83HQ6ZRV2 1179 aaPredicted RBP9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 OR4N4Q8N0Y3 316 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 KHSRPQ92945 711 aaKnown RBP eCLIP9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 MUS81Q96NY9 551 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 BIRC8Q96P09 236 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 MED18Q9BUE0 208 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 SLC19A3Q9BZV2 496 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 EVA1AQ9H8M9 152 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 AASSQ9UDR5 926 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 ABCG2Q9UNQ0 655 aa9.95□□□□□ -0.82
SYNPO2-201ENST00000307142 C5orf67F2Z3F1 127 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 EIF1BO60739 113 aaKnown RBP9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 ITGB2P05107 769 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 TBC1D28Q2M2D7 210 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 C22orf42Q6IC83 251 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 FAM122AQ96E09 287 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 C3orf30Q96M34 536 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 CNTRLQ7Z7A1 2325 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 OR6C76A6NM76 312 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 H0YIG0 161 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 ADAP00813 363 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 CEACAM5P06731 702 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 PAX7P23759 505 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 BIDP55957 195 aa9.94□□□□□ -0.82
SYNPO2-201ENST00000307142 CPOQ8IVL8 374 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms