RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 OR2S2Q9NQN1 319 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 FKBP14Q9NWM8 211 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 FTSJ1Q9UET6 329 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 LRIT2A6NDA9 550 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 FCMRO60667 390 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 SC5DO75845 299 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 UBL3O95164 117 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 HSD11B1P28845 292 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 PTPN6P29350 595 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 EVX1P49640 407 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 GZMKP49863 264 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 ERVFC1P60507 584 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 COL28A1Q2UY09 1125 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 PRSS45Q7RTY3 260 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 TMEM17Q86X19 198 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 BBS1Q8NFJ9 593 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 OR14A2Q96R54 314 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 MBD1Q9UIS9 605 aaPredicted RBP12.37□□□□□ -0.43
DDX54-201ENST00000306014 SCN4AP35499 1836 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 ARID1AO14497 2285 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 PPM1DO15297 605 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 SCO2O43819 266 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 PSMB1P20618 241 aaKnown RBP12.37□□□□□ -0.43
DDX54-201ENST00000306014 SLC48A1Q6P1K1 146 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 OR52R1Q8NGF1 315 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 NKX2-4Q9H2Z4 354 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 DZANK1Q9NVP4 752 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 GLTPQ9NZD2 209 aa12.37□□□□□ -0.43
DDX54-201ENST00000306014 HBQ1P09105 142 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 HOXC8P31273 242 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 PRKAR1BP31321 381 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 NRG3P56975 720 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 GALEQ14376 348 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 RAB11BQ15907 218 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 NKPD1Q17RQ9 610 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 ALG10Q5BKT4 473 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 RNF165Q6ZSG1 346 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 SLC29A4Q7RTT9 530 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 VN1R2Q8NFZ6 395 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 NEK7Q8TDX7 302 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 MFFQ9GZY8 342 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 PRDM9Q9NQV7 894 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 A0A1W2PR48 441 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 ARRDC5A6NEK1 342 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 TEX46H3BTG2 121 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 OPRD1P41143 372 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 VEGFCP49767 419 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 TPBGQ13641 420 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 HACD4Q5VWC8 232 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 HAGHLQ6PII5 290 aaPredicted RBP12.36□□□□□ -0.43
DDX54-201ENST00000306014 TMEM205Q6UW68 189 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 OR2L8Q8NGY9 312 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 ALG14Q96F25 216 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 RABL2AQ9UBK7 228 aaPredicted RBP12.36□□□□□ -0.43
DDX54-201ENST00000306014 RABL2BQ9UNT1 228 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 NAALAD2Q9Y3Q0 740 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 CHST2Q9Y4C5 530 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 DCDC2BA2VCK2 349 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 EEF1E1-BLOC1S5C9J1V9 151 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 F5H5P2 479 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 LCMT2O60294 686 aaKnown RBP12.36□□□□□ -0.43
DDX54-201ENST00000306014 PDGFAP04085 211 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 HRGP04196 525 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 ZNF806P0C7X5 589 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 SLC6A9P48067 706 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 SIRPAP78324 504 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 ALKAL2Q6UX46 152 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 CCDC71Q8IV32 467 aaPredicted RBP12.36□□□□□ -0.43
DDX54-201ENST00000306014 TMEM99Q8N816 258 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 ASB12Q8WXK4 309 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 PLA2G12AQ9BZM1 189 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 ACTR10Q9NZ32 417 aa12.36□□□□□ -0.43
DDX54-201ENST00000306014 MN1Q10571 1320 aaPredicted RBP12.36□□□□□ -0.43
DDX54-201ENST00000306014 IGLV3-16A0A075B6K0 115 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 ZNF878C9JN71 531 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 PRKXP51817 358 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 RPE65Q16518 533 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 CAMKMTQ7Z624 323 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 SYT9Q86SS6 491 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 BOLLQ8N9W6 283 aaKnown RBP12.35□□□□□ -0.43
DDX54-201ENST00000306014 C19orf43Q9BQ61 176 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 SLC6A14Q9UN76 642 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 TRABD2BA6NFA1 517 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 KCNJ13O60928 360 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 ZNF780AO75290 641 aaPredicted RBP12.35□□□□□ -0.43
DDX54-201ENST00000306014 RLN2P04090 185 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 HCKP08631 526 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 BSGP35613 385 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 PBX2P40425 430 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 CHAF1BQ13112 559 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 BTN1A1Q13410 526 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 RNASE10Q5GAN6 216 aaKnown RBP12.35□□□□□ -0.43
DDX54-201ENST00000306014 ASTLQ6HA08 431 aaPredicted RBP12.35□□□□□ -0.43
DDX54-201ENST00000306014 C1orf94Q6P1W5 598 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 ULK3Q6PHR2 472 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 TMPRSS9Q7Z410 1059 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 TECPR1Q7Z6L1 1165 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 EPHA6Q9UF33 1036 aa12.35□□□□□ -0.43
DDX54-201ENST00000306014 ATXN7L1Q9ULK2 861 aaPredicted RBP12.35□□□□□ -0.43
DDX54-201ENST00000306014 DPM1O60762 260 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms