RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 TRHRP34981 398 aaPredicted RBP13.05□□□□□ -0.32
SDC2-201ENST00000302190 MVDP53602 400 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 RPE65Q16518 533 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 DCST2Q5T1A1 773 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 GPR135Q8IZ08 494 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 FAM26EQ8N5C1 309 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 LINC01555Q8NAE3 123 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 OR7G2Q8NG99 324 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 OR9A4Q8NGU2 314 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 THAP4Q8WY91 577 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 RAB7BQ96AH8 199 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 MS4A6EQ96DS6 147 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 SLC35A4Q96G79 324 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 APOOQ9BUR5 198 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 Q9N2J8 555 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 RCE1Q9Y256 329 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 CACNG2Q9Y698 323 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 PLXNA3P51805 1871 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 LTBP2Q14767 1821 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 CASC3O15234 703 aaKnown RBP13.05□□□□□ -0.32
SDC2-201ENST00000302190 OLFM2O95897 454 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 CFL1P23528 166 aaKnown RBP13.05□□□□□ -0.32
SDC2-201ENST00000302190 LCN1P31025 176 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 PXNP49023 591 aaPredicted RBP13.05□□□□□ -0.32
SDC2-201ENST00000302190 GDI2P50395 445 aaKnown RBP13.05□□□□□ -0.32
SDC2-201ENST00000302190 PSMA6P60900 246 aaKnown RBP13.05□□□□□ -0.32
SDC2-201ENST00000302190 MAT1AQ00266 395 aaKnown RBP13.05□□□□□ -0.32
SDC2-201ENST00000302190 CLVS2Q5SYC1 327 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 FAAP20Q6NZ36 180 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 LILRA6Q6PI73 481 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 GALNTL5Q7Z4T8 443 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 OR2A1Q8NGT9 310 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 COQ10AQ96MF6 247 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 DGAT2Q96PD7 388 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 OR14A2Q96R54 314 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 SLC38A3Q99624 504 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 GLTPQ9NZD2 209 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 TMEM5Q9Y2B1 443 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 CDHR4A6H8M9 788 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 OTOL1A6NHN0 477 aaPredicted RBP13.05□□□□□ -0.32
SDC2-201ENST00000302190 FZD7O75084 574 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 PTHLHP12272 177 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 MAGEB1P43366 347 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 PITPNAQ00169 270 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 DLX2Q07687 328 aaPredicted RBP13.05□□□□□ -0.32
SDC2-201ENST00000302190 YIF1BQ5BJH7 314 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 CLDN22Q8N7P3 220 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 CEP76Q8TAP6 659 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 MRGPRX3Q96LB0 322 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 A3GALT2U3KPV4 340 aa13.05□□□□□ -0.32
SDC2-201ENST00000302190 GXYLT2A0PJZ3 443 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 RNF13O43567 381 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 GREM1O60565 184 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 AGR2O95994 175 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 TP53P04637 393 aaPredicted RBP13.04□□□□□ -0.32
SDC2-201ENST00000302190 REEP5Q00765 189 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 SF3A2Q15428 464 aaKnown RBP13.04□□□□□ -0.32
SDC2-201ENST00000302190 ITPRIPL2Q3MIP1 535 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 LEG1Q6P5S2 330 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 ZNF511Q8NB15 262 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 OR8D4Q8NGM9 314 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 TBC1D20Q96BZ9 403 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 LRRC3BQ96PB8 259 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 OR51J1Q9H342 316 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 TBC1D29Q9UFV1 150 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 ADAM18Q9Y3Q7 739 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 ANAPC1Q9H1A4 1944 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 ZNF879B4DU55 563 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 ARPC1BO15143 372 aaKnown RBP13.04□□□□□ -0.32
SDC2-201ENST00000302190 HCRTR2O43614 444 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 PROS1P07225 676 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 SRSF5Q13243 272 aaKnown RBP13.04□□□□□ -0.32
SDC2-201ENST00000302190 ARHGAP19Q14CB8 494 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 MEPCEQ7L2J0 689 aaKnown RBP13.04□□□□□ -0.32
SDC2-201ENST00000302190 CNOT9Q92600 299 aaKnown RBP13.04□□□□□ -0.32
SDC2-201ENST00000302190 S100A16Q96FQ6 103 aaKnown RBP13.04□□□□□ -0.32
SDC2-201ENST00000302190 NMNAT3Q96T66 252 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 MICU1Q9BPX6 476 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 HEBP2Q9Y5Z4 205 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 SERPINA3P01011 423 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 EVI2BP34910 448 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 SKP1P63208 163 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 IRF3Q14653 427 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 LIN54Q6MZP7 749 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 SLC48A1Q6P1K1 146 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 FCRLAQ7L513 359 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 TSEN54Q7Z6J9 526 aaKnown RBP13.04□□□□□ -0.32
SDC2-201ENST00000302190 OR52R1Q8NGF1 315 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 MOSPD2Q8NHP6 518 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 HYLS1Q96M11 299 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 C1QTNF2Q9BXJ5 285 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.04□□□□□ -0.32
SDC2-201ENST00000302190 LYARQ9NX58 379 aaKnown RBP13.04□□□□□ -0.32
SDC2-201ENST00000302190 COMMD9Q9P000 198 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 LAMP5Q9UJQ1 280 aa13.04□□□□□ -0.32
SDC2-201ENST00000302190 ARPC5O15511 151 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 LALBAP00709 142 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 ALDOBP05062 364 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 MAKP20794 623 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 VASPP50552 380 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms