RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 IGFBP2P18065 325 aa16.31■□□□□ 0.2
SPSB3-201ENST00000301717 ACAA2P42765 397 aaKnown RBP16.31■□□□□ 0.2
SPSB3-201ENST00000301717 KIR2DL2P43627 348 aaPredicted RBP16.31■□□□□ 0.2
SPSB3-201ENST00000301717 CARD18P57730 90 aa16.31■□□□□ 0.2
SPSB3-201ENST00000301717 MMEL1Q495T6 779 aa16.31■□□□□ 0.2
SPSB3-201ENST00000301717 RNF220Q5VTB9 566 aa16.31■□□□□ 0.2
SPSB3-201ENST00000301717 NANOGP8Q6NSW7 305 aa16.31■□□□□ 0.2
SPSB3-201ENST00000301717 REEP3Q6NUK4 255 aa16.31■□□□□ 0.2
SPSB3-201ENST00000301717 MTDHQ86UE4 582 aaKnown RBP16.31■□□□□ 0.2
SPSB3-201ENST00000301717 TREML1Q86YW5 311 aa16.31■□□□□ 0.2
SPSB3-201ENST00000301717 OR10A6Q8NH74 314 aa16.31■□□□□ 0.2
SPSB3-201ENST00000301717 TMEM234Q8WY98 164 aa16.31■□□□□ 0.2
SPSB3-201ENST00000301717 RCN3Q96D15 328 aa16.31■□□□□ 0.2
SPSB3-201ENST00000301717 OR5B2Q96R09 309 aa16.31■□□□□ 0.2
SPSB3-201ENST00000301717 TMEM38AQ9H6F2 299 aa16.31■□□□□ 0.2
SPSB3-201ENST00000301717 KAT8Q9H7Z6 458 aaKnown RBP16.31■□□□□ 0.2
SPSB3-201ENST00000301717 NANOGQ9H9S0 305 aa16.31■□□□□ 0.2
SPSB3-201ENST00000301717 STOML1Q9UBI4 398 aa16.31■□□□□ 0.2
SPSB3-201ENST00000301717 HNRNPRO43390 633 aaKnown RBP16.3■□□□□ 0.2
SPSB3-201ENST00000301717 SMNDC1O75940 238 aaKnown RBP eCLIP16.3■□□□□ 0.2
SPSB3-201ENST00000301717 OPN1SWP03999 348 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 THBS1P07996 1170 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 OPRM1P35372 400 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 ASCL1P50553 236 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 LARS2Q15031 903 aaKnown RBP16.3■□□□□ 0.2
SPSB3-201ENST00000301717 ZNF239Q16600 458 aaKnown RBP16.3■□□□□ 0.2
SPSB3-201ENST00000301717 C3orf33Q6P1S2 294 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 GRINAQ7Z429 371 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 BTLAQ7Z6A9 289 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 ADGRG3Q86Y34 549 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 MCEMP1Q8IX19 187 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 ZZZ3Q8IYH5 903 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 ZNF295-AS1Q8N0V1 137 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 ACBD4Q8NC06 268 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 ABHD3Q8WU67 409 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 PMM1Q92871 262 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 LRRC58Q96CX6 371 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 STARD4Q96DR4 205 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 ARL5BQ96KC2 179 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 WFDC6Q9BQY6 131 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 SFXN3Q9BWM7 321 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 PRR14Q9BWN1 585 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 SPATA9Q9BWV2 254 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 OPN3Q9H1Y3 402 aaPredicted RBP16.3■□□□□ 0.2
SPSB3-201ENST00000301717 GMPR2Q9P2T1 348 aaKnown RBP16.3■□□□□ 0.2
SPSB3-201ENST00000301717 OSGIN1Q9UJX0 560 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 CORO2BQ9UQ03 480 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 HCFC1P51610 2035 aa16.3■□□□□ 0.2
SPSB3-201ENST00000301717 GMNCA6NCL1 334 aa16.29■□□□□ 0.2
SPSB3-201ENST00000301717 GCM2O75603 506 aaPredicted RBP16.29■□□□□ 0.2
SPSB3-201ENST00000301717 SYNGR4O95473 234 aa16.29■□□□□ 0.2
SPSB3-201ENST00000301717 IL18BPO95998 194 aa16.29■□□□□ 0.2
SPSB3-201ENST00000301717 TFPIP10646 304 aa16.29■□□□□ 0.2
SPSB3-201ENST00000301717 ENPP1P22413 925 aa16.29■□□□□ 0.2
SPSB3-201ENST00000301717 SLC6A2P23975 617 aa16.29■□□□□ 0.2
SPSB3-201ENST00000301717 TACR3P29371 465 aa16.29■□□□□ 0.2
SPSB3-201ENST00000301717 SLC7A1P30825 629 aa16.29■□□□□ 0.2
SPSB3-201ENST00000301717 CYLC2Q14093 348 aaPredicted RBP16.29■□□□□ 0.2
SPSB3-201ENST00000301717 PRAMEF8Q5VWM4 474 aa16.29■□□□□ 0.2
SPSB3-201ENST00000301717 PRAMEF7Q5VXH5 474 aa16.29■□□□□ 0.2
SPSB3-201ENST00000301717 CADM2Q8N3J6 435 aa16.29■□□□□ 0.2
SPSB3-201ENST00000301717 ZFP3Q96NJ6 502 aa16.29■□□□□ 0.2
SPSB3-201ENST00000301717 JKAMPQ9P055 326 aa16.29■□□□□ 0.2
SPSB3-201ENST00000301717 ZNF232Q9UNY5 417 aa16.29■□□□□ 0.2
SPSB3-201ENST00000301717 CACNA1DQ01668 2161 aa16.29■□□□□ 0.2
SPSB3-201ENST00000301717 TMED7-TICAM2A0A0A6YYA0 188 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 TMEM72A0PK05 275 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 ZC3H12DA2A288 527 aaKnown RBP16.28■□□□□ 0.2
SPSB3-201ENST00000301717 SNX3O60493 162 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 ETS2P15036 469 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 GZMMP51124 257 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 DMTNQ08495 405 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 GUSBP1Q15486 140 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 MAPRE2Q15555 327 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 SYT14P1Q58G82 188 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 OR2A2Q6IF42 318 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 CPLX4Q7Z7G2 160 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 SMYD1Q8NB12 490 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 HIPK4Q8NE63 616 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 SPOCK3Q9BQ16 436 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 CACYBPQ9HB71 228 aaKnown RBP16.28■□□□□ 0.2
SPSB3-201ENST00000301717 CHRNA9Q9UGM1 479 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 MCTS1Q9ULC4 181 aaKnown RBP16.28■□□□□ 0.2
SPSB3-201ENST00000301717 IFT52Q9Y366 437 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 TMED7Q9Y3B3 224 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 TEX15Q9BXT5 2789 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 CSMD2Q7Z408 3487 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 ANKHD1Q8IWZ3 2542 aaKnown RBP16.28■□□□□ 0.2
SPSB3-201ENST00000301717 GJE1A6NN92 205 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 BBIP1A8MTZ0 92 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 COX4I1P13073 169 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 CPOXP36551 454 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 APOBEC1P41238 236 aaKnown RBP16.28■□□□□ 0.2
SPSB3-201ENST00000301717 SLC1A3P43003 542 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 BNIP2Q12982 314 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 PDSS1Q5T2R2 415 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 NET1Q7Z628 596 aaPredicted RBP16.28■□□□□ 0.2
SPSB3-201ENST00000301717 DMRTC2Q8IXT2 367 aaPredicted RBP16.28■□□□□ 0.2
SPSB3-201ENST00000301717 C11orf65Q8NCR3 313 aa16.28■□□□□ 0.2
SPSB3-201ENST00000301717 RNASE6Q93091 150 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms