RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 C17orf67Q0P5P2 114 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 SSPNQ14714 243 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 RAB39AQ14964 217 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 SLC30A6Q6NXT4 461 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 SMARCD3Q6STE5 483 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 ATG4DQ86TL0 474 aaPredicted RBP14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 OAFQ86UD1 273 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 SLC43A2Q8N370 569 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 GGHQ92820 318 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 HGDQ93099 445 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 PLEKHA8Q96JA3 519 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 SAMD8Q96LT4 415 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 RHNO1Q9BSD3 238 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 RBM38Q9H0Z9 239 aaKnown RBP14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 AMBNQ9NP70 447 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 MED17Q9NVC6 651 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 FKBP14Q9NWM8 211 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 SNTNA6NMZ2 147 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 DLL1O00548 723 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 SOCS6O14544 535 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 PRKYO43930 277 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 ZNF354AO60765 605 aaPredicted RBP14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 ENTPD6O75354 484 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 FBXO45P0C2W1 286 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 EMX1Q04741 257 aaPredicted RBP14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 TUBA3CQ13748 450 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 PGGHGQ32M88 737 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 STX19Q8N4C7 294 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 OR13C2Q8NGS9 318 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 B4GALNT2Q8NHY0 566 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 TMEM163Q8TC26 289 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 NACC2Q96BF6 587 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 SGTBQ96EQ0 304 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 TMEM43Q9BTV4 400 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 FOXJ2Q9P0K8 574 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 SIGLEC7Q9Y286 467 aa14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 RPL36Q9Y3U8 105 aaKnown RBP14.35□□□□□ -0.11
HERPUD1-201ENST00000300302 HEATR5AQ86XA9 2040 aa14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 A0A1W2PNU3 283 aaPredicted RBP14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 CDC40O60508 579 aaKnown RBP eCLIP14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 IGF2P01344 180 aa14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 MT-ND2P03891 347 aa14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 CDK1P06493 297 aa14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 ICAM2P13598 275 aa14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 PCMT1P22061 227 aa14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 EFNB1P98172 346 aa14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 OR4Q3Q8NH05 313 aa14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 DUSP19Q8WTR2 217 aa14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 LRR1Q96L50 414 aa14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 RASL10BQ96S79 203 aa14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 B3GNT4Q9C0J1 378 aa14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 YIPF3Q9GZM5 350 aa14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 ADAM19Q9H013 955 aa14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 UBQLN3Q9H347 655 aa14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 RYDENQ9NUL5 291 aaKnown RBP14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 GPR83Q9NYM4 423 aa14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 DNAJC27Q9NZQ0 273 aa14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 CEPT1Q9Y6K0 416 aa14.34□□□□□ -0.11
HERPUD1-201ENST00000300302 PROB1E7EW31 1015 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 H3BSA7 217 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 SURF4O15260 269 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 GMFGO60234 142 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 PIPP12273 146 aaPredicted RBP14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 GP1BBP13224 206 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 FUT1P19526 365 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 TACR3P29371 465 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 OTX2P32243 289 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 SLC9A3P48764 834 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 ST3GAL4Q11206 333 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 RTL4Q6ZR62 310 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 NLGN4YQ8NFZ3 816 aaPredicted RBP14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 OR13F1Q8NGS4 319 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 RORBQ92753 470 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 SPACA9Q96E40 222 aaPredicted RBP14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 SIGLEC11Q96RL6 698 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 GPR87Q9BY21 358 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 FAM117AQ9C073 453 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 ZNF160Q9HCG1 818 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 HHATLQ9HCP6 504 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 SDHAF3Q9NRP4 125 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 KLRF1Q9NZS2 232 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 IL20RAQ9UHF4 553 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 BAIAP2Q9UQB8 552 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 EXPH5Q8NEV8 1989 aa14.33□□□□□ -0.11
HERPUD1-201ENST00000300302 C21orf140B9A014 251 aa14.33□□□□□ -0.12
HERPUD1-201ENST00000300302 PTP4A3O75365 173 aa14.33□□□□□ -0.12
HERPUD1-201ENST00000300302 ITGA10O75578 1167 aa14.33□□□□□ -0.12
HERPUD1-201ENST00000300302 SEC14L2O76054 403 aa14.33□□□□□ -0.12
HERPUD1-201ENST00000300302 TNFSF15O95150 251 aa14.33□□□□□ -0.12
HERPUD1-201ENST00000300302 FADS2O95864 444 aaKnown RBP14.33□□□□□ -0.12
HERPUD1-201ENST00000300302 CXCR1P25024 350 aa14.33□□□□□ -0.12
HERPUD1-201ENST00000300302 MST1P26927 711 aa14.33□□□□□ -0.12
HERPUD1-201ENST00000300302 GRK5P34947 590 aa14.33□□□□□ -0.12
HERPUD1-201ENST00000300302 SUMO3P55854 103 aaPredicted RBP14.33□□□□□ -0.12
HERPUD1-201ENST00000300302 RPS18P62269 152 aaKnown RBP14.33□□□□□ -0.12
HERPUD1-201ENST00000300302 NTRK2Q16620 822 aa14.33□□□□□ -0.12
HERPUD1-201ENST00000300302 TMEM44Q2T9K0 475 aa14.33□□□□□ -0.12
HERPUD1-201ENST00000300302 CNPY1Q3B7I2 92 aa14.33□□□□□ -0.12
HERPUD1-201ENST00000300302 SYT14P1Q58G82 188 aa14.33□□□□□ -0.12
HERPUD1-201ENST00000300302 LYPD8Q6UX82 237 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms