RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 SCARB1Q8WTV0 552 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 NKD1Q969G9 470 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 GLS2Q9UI32 602 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 HCFC2Q9Y5Z7 792 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 RIIAD1A6NNX1 92 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 UBL3O95164 117 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 RLN2P04090 185 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 HMGN1P05114 100 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 C1SP09871 688 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 MTNR1BP49286 362 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 ARTNQ5T4W7 220 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 IRF7Q92985 503 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 BRF2Q9HAW0 419 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 NIT2Q9NQR4 276 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 PTTG3PQ9NZH4 202 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 MKL2Q9ULH7 1088 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 CDHR4A6H8M9 788 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 TTLL8A6PVC2 850 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 RAD1O60671 282 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 DPM1O60762 260 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 SULT1A3P0DMM9 295 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 SULT1A4P0DMN0 295 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 HSD3B2P26439 372 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 LUMP51884 338 aaPredicted RBP13.81□□□□□ -0.2
SPIDR-201ENST00000297423 ZP1P60852 638 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 ST8SIA6P61647 398 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 ID2Q02363 134 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 PGGHGQ32M88 737 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 PCGF3Q3KNV8 242 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 LINC00303Q3SY05 128 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 ARSIQ5FYB1 569 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 LY6G5CQ5SRR4 150 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 FAM71E1Q6IPT2 247 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 UNQ6126/PRO20091Q6UXV3 157 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 SPRED2Q7Z698 418 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 SLC22A8Q8TCC7 542 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 SMPDL3BQ92485 455 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 PELOQ9BRX2 385 aaKnown RBP13.81□□□□□ -0.2
SPIDR-201ENST00000297423 HRASLSQ9HDD0 168 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 AKAP7Q9P0M2 348 aaPredicted RBP13.81□□□□□ -0.2
SPIDR-201ENST00000297423 RTTNQ86VV8 2226 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 TRAV27A0A087WT01 109 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 FAM157BP0CG42 384 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 TYRP14679 529 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 SMCO1Q147U7 214 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 PAN3Q58A45 887 aaKnown RBP13.81□□□□□ -0.2
SPIDR-201ENST00000297423 TMEM201Q5SNT2 666 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 CASTOR1Q8WTX7 329 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 FBXL4Q9UKA2 621 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 SLC7A7Q9UM01 511 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 LIPT1Q9Y234 373 aa13.81□□□□□ -0.2
SPIDR-201ENST00000297423 C7orf66A4D0T2 115 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 F5H5P2 479 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 MAS1P04201 325 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 MPC1LP0DKB6 136 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 GTF2F2P13984 249 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 PXNP49023 591 aaPredicted RBP13.8□□□□□ -0.2
SPIDR-201ENST00000297423 CCR9P51686 369 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 COMTD1Q86VU5 262 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 CMTM4Q8IZR5 234 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 POGLUT1Q8NBL1 392 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 PXT1Q8NFP0 134 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 S100A16Q96FQ6 103 aaKnown RBP13.8□□□□□ -0.2
SPIDR-201ENST00000297423 PINK1Q9BXM7 581 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 OR2S2Q9NQN1 319 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 LINC01387J3KSC0 135 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 BET1O15155 118 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 GPR1P46091 355 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 ARFIP1P53367 373 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 PCBP3P57721 371 aaKnown RBP13.8□□□□□ -0.2
SPIDR-201ENST00000297423 POLR2LP62875 67 aaKnown RBP13.8□□□□□ -0.2
SPIDR-201ENST00000297423 C9orf50Q5SZB4 431 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 CCNJQ5T5M9 372 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 ZNF546Q86UE3 836 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 PLA2G15Q8NCC3 412 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 PTP4A1Q93096 173 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 CD180Q99467 661 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 SPHK2Q9NRA0 654 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 KLHL9Q9P2J3 617 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 KIF25Q9UIL4 384 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 IKZF2Q9UKS7 526 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 MCRIP1C9JLW8 97 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 CASC3O15234 703 aaKnown RBP13.8□□□□□ -0.2
SPIDR-201ENST00000297423 PI15O43692 258 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 DRD2P14416 443 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 PPP3CBP16298 524 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 NPPBP16860 134 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 MAT2AP31153 395 aaKnown RBP13.8□□□□□ -0.2
SPIDR-201ENST00000297423 KCNJ3P48549 501 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 FLI1Q01543 452 aaPredicted RBP13.8□□□□□ -0.2
SPIDR-201ENST00000297423 SP140Q13342 867 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 TMEM17Q86X19 198 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 BVESQ8NE79 360 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 OR4K13Q8NH42 304 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 PRRC1Q96M27 445 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 LDAHQ9H6V9 325 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 NEUROD4Q9HD90 331 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 MBD2Q9UBB5 411 aa13.8□□□□□ -0.2
SPIDR-201ENST00000297423 NOP16Q9Y3C1 178 aaKnown RBP13.8□□□□□ -0.2
SPIDR-201ENST00000297423 KCNE3Q9Y6H6 103 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms