RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 WISP2O76076 250 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 THY1P04216 161 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 CELA3AP09093 270 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 NR1H2P55055 460 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 TUBA4AP68366 448 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 APOFQ13790 326 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 SLC36A3Q495N2 470 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 POMZP3Q6PJE2 187 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 YRDCQ86U90 279 aaKnown RBP13.75□□□□□ -0.21
CCDC140-201ENST00000295226 RANBP3LQ86VV4 465 aaPredicted RBP13.75□□□□□ -0.21
CCDC140-201ENST00000295226 ZNF440Q8IYI8 595 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 DHRSXQ8N5I4 330 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 RNF217Q8TC41 542 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 ADAMTS16Q8TE57 1224 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 C1GALT1C1Q96EU7 318 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 TSC22D3Q99576 134 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 OSBPL10Q9BXB5 764 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 YTHDF1Q9BYJ9 559 aaKnown RBP13.75□□□□□ -0.21
CCDC140-201ENST00000295226 MED17Q9NVC6 651 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 A4GNTQ9UNA3 340 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 TESMINQ9Y4I5 508 aa13.75□□□□□ -0.21
CCDC140-201ENST00000295226 A0A1B0GWA3 101 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 ZIC3O60481 467 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 CBR3O75828 277 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 ZNF23P17027 643 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 PGCP20142 388 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 DPP4P27487 766 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 GDF1P27539 372 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 MSX1P28360 303 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 MAGEA2P43356 314 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 MAGEA5P43359 124 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 TAS2R41P59536 307 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 PPIAP62937 165 aaKnown RBP13.74□□□□□ -0.21
CCDC140-201ENST00000295226 KCTD21Q4G0X4 260 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 PCSK4Q6UW60 755 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 PLEKHM3Q6ZWE6 761 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 TMEM251Q8N6I4 163 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 ZFP62Q8NB50 900 aaPredicted RBP13.74□□□□□ -0.21
CCDC140-201ENST00000295226 OR52J3Q8NH60 311 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 TAAR6Q96RI8 345 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 ZNF559Q9BR84 538 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 TSPAN10Q9H1Z9 355 aaPredicted RBP13.74□□□□□ -0.21
CCDC140-201ENST00000295226 ADNPQ9H2P0 1102 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 VNN3Q9NY84 501 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 TAS2R10Q9NYW0 307 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 TESQ9UGI8 421 aaKnown RBP13.74□□□□□ -0.21
CCDC140-201ENST00000295226 TUBD1Q9UJT1 453 aa13.74□□□□□ -0.21
CCDC140-201ENST00000295226 FAM32AQ9Y421 112 aaKnown RBP13.74□□□□□ -0.21
CCDC140-201ENST00000295226 EI24O14681 340 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 GLSO94925 669 aaPredicted RBP13.73□□□□□ -0.21
CCDC140-201ENST00000295226 CCNA2P20248 432 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 ELAVL4P26378 380 aaKnown RBP13.73□□□□□ -0.21
CCDC140-201ENST00000295226 CAPGP40121 348 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 SLC6A8P48029 635 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 ALDH3A2P51648 485 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 ZNF41P51814 821 aaPredicted RBP13.73□□□□□ -0.21
CCDC140-201ENST00000295226 CDH12P55289 794 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 COPZ1P61923 177 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 PLPPR5Q32ZL2 321 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 GDF7Q7Z4P5 450 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 ZDHHC13Q8IUH4 622 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 POC1BQ8TC44 478 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 UBL7Q96S82 380 aaPredicted RBP13.73□□□□□ -0.21
CCDC140-201ENST00000295226 YIPF3Q9GZM5 350 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 DEFB127Q9H1M4 99 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 UBQLN3Q9H347 655 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 PTGES2Q9H7Z7 377 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 TMEM27Q9HBJ8 222 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 DKKL1Q9UK85 242 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 SLC7A7Q9UM01 511 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 PCDHGB6Q9Y5F9 930 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 ZNF407Q9C0G0 2248 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 EPG5Q9HCE0 2579 aa13.73□□□□□ -0.21
CCDC140-201ENST00000295226 PDLIM1O00151 329 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 CST1P01037 141 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 OPN1LWP04000 364 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 GP1BBP13224 206 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 PRKCAP17252 672 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 RHCEP18577 417 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 HK1P19367 917 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 IL11P20809 199 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 TACR3P29371 465 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 IST1P53990 364 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 SUMO3P55854 103 aaPredicted RBP13.72□□□□□ -0.21
CCDC140-201ENST00000295226 DSCR4P56555 118 aaPredicted RBP13.72□□□□□ -0.21
CCDC140-201ENST00000295226 FOXF1Q12946 379 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 DAG1Q14118 895 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 WIPI1Q5MNZ9 446 aaPredicted RBP13.72□□□□□ -0.21
CCDC140-201ENST00000295226 WBP2NLQ6ICG8 309 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 PIWIL3Q7Z3Z3 882 aaKnown RBP13.72□□□□□ -0.21
CCDC140-201ENST00000295226 P3H2Q8IVL5 708 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 Q8NA96 180 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 FAM83FQ8NEG4 500 aaPredicted RBP13.72□□□□□ -0.21
CCDC140-201ENST00000295226 TSPAN14Q8NG11 270 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 SLC35B4Q969S0 331 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 DGCR14Q96DF8 476 aaKnown RBP13.72□□□□□ -0.21
CCDC140-201ENST00000295226 DNAJA3Q96EY1 480 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 SLC41A3Q96GZ6 507 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 PIP5K1AQ99755 562 aa13.72□□□□□ -0.21
CCDC140-201ENST00000295226 FNDC11Q9BVV2 318 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 201.9 ms