RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 SDK1Q7Z5N4 2213 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 C2orf92A0A1B0GVN3 265 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 LNP1A1A4G5 178 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 J3QRK9 145 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 APOL3O95236 402 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 SLC2A10O95528 541 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 NGFRP08138 427 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 FUT1P19526 365 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 ENDOUP21128 410 aaKnown RBP8.39□□□□□ -1.07
PDPN-201ENST00000294489 TBXA2RP21731 343 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 SOX6P35712 828 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 GAS1P54826 345 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 RPS3AP61247 264 aaKnown RBP8.39□□□□□ -1.07
PDPN-201ENST00000294489 CRYZQ08257 329 aaKnown RBP8.39□□□□□ -1.07
PDPN-201ENST00000294489 EBPQ15125 230 aaKnown RBP8.39□□□□□ -1.07
PDPN-201ENST00000294489 KIRREL2Q6UWL6 708 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 ZNF517Q6ZMY9 492 aaPredicted RBP8.39□□□□□ -1.07
PDPN-201ENST00000294489 RTL4Q6ZR62 310 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 ANKRD37Q7Z713 158 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 PPP1R3BQ86XI6 285 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 C9orf40Q8IXQ3 194 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 OR51A7Q8NH64 312 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 GAL3ST4Q96RP7 486 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 NXF5Q9H1B4 397 aaKnown RBP8.39□□□□□ -1.07
PDPN-201ENST00000294489 HINT3Q9NQE9 182 aaKnown RBP8.39□□□□□ -1.07
PDPN-201ENST00000294489 RXFP3Q9NSD7 469 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 CCDC59Q9P031 241 aaKnown RBP8.39□□□□□ -1.07
PDPN-201ENST00000294489 MKL2Q9ULH7 1088 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 CARD8Q9Y2G2 431 aa8.39□□□□□ -1.07
PDPN-201ENST00000294489 B4E171 279 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 TSPAN19P0C672 248 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 CD59P13987 128 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 NOS3P29474 1203 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 TSPAN7P41732 249 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 LIMK1P53667 647 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 FXYD6P3P58550 94 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 SOWAHCQ53LP3 525 aaPredicted RBP8.38□□□□□ -1.07
PDPN-201ENST00000294489 SLC35F1Q5T1Q4 408 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 TCEAL6Q6IPX3 200 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 TMEM205Q6UW68 189 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 PRSS58Q8IYP2 241 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 PSD4Q8NDX1 1056 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 FNDC8Q8TC99 324 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 TCEAL3Q969E4 200 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 HSPBAP1Q96EW2 488 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 WDR54Q9H977 334 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 AKIP1Q9NQ31 210 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 EXOSC3Q9NQT5 275 aaKnown RBP8.38□□□□□ -1.07
PDPN-201ENST00000294489 NDUFB11Q9NX14 153 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 STUB1Q9UNE7 303 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 SSR3Q9UNL2 185 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 B3GNT3Q9Y2A9 372 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 CORINQ9Y5Q5 1042 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 TRAV27A0A087WT01 109 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 RIIAD1A6NNX1 92 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 GTPBP1O00178 669 aaKnown RBP8.38□□□□□ -1.07
PDPN-201ENST00000294489 CDX4O14627 284 aaPredicted RBP8.38□□□□□ -1.07
PDPN-201ENST00000294489 CBFA2T3O75081 653 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 PTP4A3O75365 173 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 RFPL3O75679 317 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 PPM1BO75688 479 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 UBL4AP11441 157 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 SLC6A6P31641 620 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 FOXK2Q01167 660 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 LPAL2Q16609 132 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 ANKDD1AQ495B1 522 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 LIPKQ5VXJ0 399 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 PLBD1Q6P4A8 553 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 PHC2Q8IXK0 858 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 AGBL5Q8NDL9 886 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 PHOSPHO1Q8TCT1 267 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 NACC2Q96BF6 587 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 LMF1Q96S06 567 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 CCNL2Q96S94 520 aaPredicted RBP8.38□□□□□ -1.07
PDPN-201ENST00000294489 RNF167Q9H6Y7 350 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 APMAPQ9HDC9 416 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 ISYNA1Q9NPH2 558 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 CMC2Q9NRP2 79 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 TNFRSF10DQ9UBN6 386 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 EXOGQ9Y2C4 368 aaKnown RBP8.38□□□□□ -1.07
PDPN-201ENST00000294489 SPIN1Q9Y657 262 aaPredicted RBP8.38□□□□□ -1.07
PDPN-201ENST00000294489 BDP1A6H8Y1 2624 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 A0A087WUJ7 227 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 METTL15A6NJ78 407 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 FAM183AA6NL82 134 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 PRR23D1E9PI22 279 aaPredicted RBP8.38□□□□□ -1.07
PDPN-201ENST00000294489 PRKNO60260 465 aaPredicted RBP8.38□□□□□ -1.07
PDPN-201ENST00000294489 TSPAN2O60636 221 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 GPX5O75715 221 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 UTS2O95399 124 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 ZNF806P0C7X5 589 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 PRR23D2P0DMB1 279 aaPredicted RBP8.38□□□□□ -1.07
PDPN-201ENST00000294489 CPEP16870 476 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 ZNF12P17014 697 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 ZNF3P17036 446 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 IL12BP29460 328 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 S100A5P33763 92 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 IDUAP35475 653 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 SLC1A3P43003 542 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 INAQ16352 499 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms