RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 KCNAB2Q13303 367 aa17.19■□□□□ 0.34
PDLIM3-202ENST00000284770 TIGD3Q6B0B8 471 aa17.19■□□□□ 0.34
PDLIM3-202ENST00000284770 LINC00114Q6XXX2 140 aa17.19■□□□□ 0.34
PDLIM3-202ENST00000284770 USP51Q70EK9 711 aa17.19■□□□□ 0.34
PDLIM3-202ENST00000284770 LINC00471Q8N535 108 aa17.19■□□□□ 0.34
PDLIM3-202ENST00000284770 OR4K17Q8NGC6 315 aa17.19■□□□□ 0.34
PDLIM3-202ENST00000284770 RNF217Q8TC41 542 aa17.19■□□□□ 0.34
PDLIM3-202ENST00000284770 CYGBQ8WWM9 190 aa17.19■□□□□ 0.34
PDLIM3-202ENST00000284770 KRT84Q9NSB2 600 aa17.19■□□□□ 0.34
PDLIM3-202ENST00000284770 A0A087WV48 116 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 A0A0G2JMM0 328 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 A0A1W2PPB8 328 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 A0A1W2PRS3 328 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 KIR3DP1A8MWS1 328 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 TAF4O00268 1085 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 CDC40O60508 579 aaKnown RBP eCLIP17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 PDK3Q15120 406 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 SLC25A25Q6KCM7 469 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 ARSKQ6UWY0 536 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 WDR88Q6ZMY6 472 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 GALNT5Q7Z7M9 940 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 TMEM255BQ8WV15 326 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 ACOT11Q8WXI4 607 aaPredicted RBP17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 TMEM234Q8WY98 164 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 ST8SIA1Q92185 356 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 CNBD2Q96M20 576 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 JSRP1Q96MG2 331 aaPredicted RBP17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 NIPSNAP1Q9BPW8 284 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 FAM118AQ9NWS6 357 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 PCDHGB5Q9Y5G0 923 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 PCDHGA9Q9Y5G4 932 aaKnown RBP17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 ORC6Q9Y5N6 252 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 NCOR2Q9Y618 2525 aa17.18■□□□□ 0.34
PDLIM3-202ENST00000284770 A0A087WUJ7 227 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 OR10H3O60404 316 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 SP1P08047 785 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 PNMTP11086 282 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 CD46P15529 392 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 TACR3P29371 465 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 ZNF41P51814 821 aaPredicted RBP17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 GPR85P60893 370 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 BORAQ6PGQ7 559 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 ZNF730Q6ZMV8 503 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 ATG4DQ86TL0 474 aaPredicted RBP17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 OR4K5Q8NGD3 323 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 HS6ST2Q96MM7 605 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 GNRHR2Q96P88 292 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 NR1H4Q96RI1 486 aaPredicted RBP17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 FAM173AQ9BQD7 235 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 ZNF426Q9BUY5 554 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 C12orf10Q9HB07 376 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 MED17Q9NVC6 651 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 CFAP47Q6ZTR5 3102 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 PCNX3Q9H6A9 2034 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 ETV2O00321 342 aaPredicted RBP17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 CBR3O75828 277 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 NTN1O95631 604 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 GASTP01350 101 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 PRKCAP17252 672 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 MYF6P23409 242 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 POLR2IP36954 125 aaKnown RBP17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 RBM34P42696 430 aaKnown RBP17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 TNFSF10P50591 281 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 DLX5P56178 289 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 LSM11P83369 360 aaKnown RBP eCLIP17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 RRM2BQ7LG56 351 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 GRINAQ7Z429 371 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 RNF113BQ8IZP6 322 aaKnown RBP17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 AQP11Q8NBQ7 271 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 TMEM239Q8WW34 195 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 C1GALT1C1Q96EU7 318 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 HES7Q9BYE0 225 aa17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 KLF13Q9Y2Y9 288 aaPredicted RBP17.17■□□□□ 0.34
PDLIM3-202ENST00000284770 EML6Q6ZMW3 1958 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 E9PQ18 207 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 SLC16A6O15403 523 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 NME2P1O60361 137 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 CLIC3O95833 236 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 NME2P22392 152 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 HTR3AP46098 478 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 PGBD2Q6P3X8 592 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 UGT2A3Q6UWM9 527 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 MBOAT2Q6ZWT7 520 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 SULF2Q8IWU5 870 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 OR2M7Q8NG81 312 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 SNRNP27Q8WVK2 155 aaKnown RBP17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 SCMH1Q96GD3 660 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 C5orf34Q96MH7 638 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 GABARAPL3Q9BY60 117 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 GRIP2Q9C0E4 1043 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 KLHL1Q9NR64 748 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 TUBA8Q9NY65 449 aaPredicted RBP17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 OSGIN1Q9UJX0 560 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 VDAC3Q9Y277 283 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 POFUT2Q9Y2G5 429 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 LOC400499M0QZD8 3231 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 DMXL2Q8TDJ6 3036 aa17.16■□□□□ 0.34
PDLIM3-202ENST00000284770 ELOA3DA6NLF2 546 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms