RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 FNDC3BQ53EP0 1204 aaKnown RBP8.56□□□□□ -1.04
PDGFC-201ENST00000274071 NKAPLQ5M9Q1 402 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 FAM27D1Q5T7N8 215 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 OR10K2Q6IF99 312 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 ABHD13Q7L211 337 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 GPRIN1Q7Z2K8 1008 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 LRRTM4Q86VH4 590 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 PARGQ86W56 976 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 IZUMO1Q8IYV9 350 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 GTPBP8Q8N3Z3 284 aaPredicted RBP8.56□□□□□ -1.04
PDGFC-201ENST00000274071 FAM24BQ8N5W8 94 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 BEND2Q8NDZ0 799 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 OR2AK2Q8NG84 335 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 STOML3Q8TAV4 291 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 SORCS1Q8WY21 1168 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 MAFIPQ8WZ33 124 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 MALSU1Q96EH3 234 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 GAL3ST4Q96RP7 486 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 TKTL2Q9H0I9 626 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 FZD8Q9H461 694 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 FBXO44Q9H4M3 255 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 NMRK2Q9NPI5 230 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 ASB6Q9NWX5 421 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 PTGFRNQ9P2B2 879 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 MRPS18CQ9Y3D5 142 aaKnown RBP8.56□□□□□ -1.04
PDGFC-201ENST00000274071 MAP4K5Q9Y4K4 846 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 MGAMO43451 1857 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 PLXNA1Q9UIW2 1896 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 EFCAB14O75071 495 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 CPSF4O95639 269 aaKnown RBP8.56□□□□□ -1.04
PDGFC-201ENST00000274071 GUCA1CO95843 209 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 LGALS2P05162 132 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 OR4E1P0C645 316 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 CSF2RAP15509 400 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 ADCYAP1R1P41586 468 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 MAGEB1P43366 347 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 NDUFA6P56556 154 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 TWF1Q12792 350 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 RAB40BQ12829 278 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 IL10RAQ13651 578 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 COL13A1Q5TAT6 717 aaPredicted RBP8.56□□□□□ -1.04
PDGFC-201ENST00000274071 DMRTA1Q5VZB9 504 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 TSSK4Q6SA08 328 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 PRSS55Q6UWB4 352 aaPredicted RBP8.56□□□□□ -1.04
PDGFC-201ENST00000274071 MPZL3Q6UWV2 235 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 ANKRD33Q7Z3H0 272 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 COMTD1Q86VU5 262 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 OR4D9Q8NGE8 314 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 WNT8BQ93098 351 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 SPACA1Q9HBV2 294 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 PCDHB11Q9Y5F2 797 aa8.56□□□□□ -1.04
PDGFC-201ENST00000274071 TRBV4-1A0A0J9YWV2 114 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 A0A1W2PPC1 479 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 UBE2QL1A1L167 161 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 MOXD2PA6NHM9 499 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 SYT5O00445 386 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 BCL2L11O43521 198 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 SH3BGRLO75368 114 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 RDH16O75452 317 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 AK1P00568 194 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 SFTPBP07988 381 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 SFTA3P0C7M3 94 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 ACP2P11117 423 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 ADORA2BP29275 332 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 MAT2AP31153 395 aaKnown RBP8.55□□□□□ -1.04
PDGFC-201ENST00000274071 KIR3DL1P43629 444 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 MECP2P51608 486 aaKnown RBP8.55□□□□□ -1.04
PDGFC-201ENST00000274071 SLC26A5P58743 744 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 CD81P60033 236 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 KIAA0141Q14154 515 aaPredicted RBP8.55□□□□□ -1.04
PDGFC-201ENST00000274071 PTPRNQ16849 979 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 LPCAT3Q6P1A2 487 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.55□□□□□ -1.04
PDGFC-201ENST00000274071 FJX1Q86VR8 437 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 RANBP3LQ86VV4 465 aaPredicted RBP8.55□□□□□ -1.04
PDGFC-201ENST00000274071 SDR9C7Q8NEX9 313 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 EEF1AKMT1Q8WVE0 214 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 FOXRED1Q96CU9 486 aaPredicted RBP8.55□□□□□ -1.04
PDGFC-201ENST00000274071 UTP23Q9BRU9 249 aaKnown RBP8.55□□□□□ -1.04
PDGFC-201ENST00000274071 CHST8Q9H2A9 424 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 TUBA4BQ9H853 241 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 RPF1Q9H9Y2 349 aaKnown RBP8.55□□□□□ -1.04
PDGFC-201ENST00000274071 GLRX2Q9NS18 164 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 MRPS18AQ9NVS2 196 aaKnown RBP8.55□□□□□ -1.04
PDGFC-201ENST00000274071 TMEM248Q9NWD8 314 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 CAMK2AQ9UQM7 478 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 DNAH12Q6ZR08 3092 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 A0A0G2JK05 382 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 TMEM272A0A1B0GTI8 110 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 ARRDC5A6NEK1 342 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 ANKRD61A6NGH8 418 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 PGRMC2O15173 223 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 HCRTO43612 131 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 ADAP00813 363 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 RPL34P49207 117 aaKnown RBP8.55□□□□□ -1.04
PDGFC-201ENST00000274071 GAGE1Q13065 139 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 TEAD2Q15562 447 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 EEF1DP3Q658K8 133 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 ETFRF1Q6IPR1 90 aa8.55□□□□□ -1.04
PDGFC-201ENST00000274071 MRNIPQ6NTE8 343 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms