RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 TEX47Q8TBZ9 253 aa12.86□□□□□ -0.35
SS18-201ENST00000269137 BRIX1Q8TDN6 353 aaKnown RBP12.86□□□□□ -0.35
SS18-201ENST00000269137 ZNF524Q96C55 264 aa12.86□□□□□ -0.35
SS18-201ENST00000269137 KLHDC3Q9BQ90 382 aa12.86□□□□□ -0.35
SS18-201ENST00000269137 TMEM43Q9BTV4 400 aa12.86□□□□□ -0.35
SS18-201ENST00000269137 PLA2G12AQ9BZM1 189 aa12.86□□□□□ -0.35
SS18-201ENST00000269137 CDCP1Q9H5V8 836 aa12.86□□□□□ -0.35
SS18-201ENST00000269137 EGLN3Q9H6Z9 239 aa12.86□□□□□ -0.35
SS18-201ENST00000269137 ATP13A2Q9NQ11 1180 aa12.86□□□□□ -0.35
SS18-201ENST00000269137 SDHAF3Q9NRP4 125 aa12.86□□□□□ -0.35
SS18-201ENST00000269137 RASSF1Q9NS23 344 aa12.86□□□□□ -0.35
SS18-201ENST00000269137 C17orf51A8MQB3 221 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 KPNA4O00629 521 aaPredicted RBP12.85□□□□□ -0.35
SS18-201ENST00000269137 CDC40O60508 579 aaKnown RBP eCLIP12.85□□□□□ -0.35
SS18-201ENST00000269137 DXOO77932 396 aaKnown RBP12.85□□□□□ -0.35
SS18-201ENST00000269137 PTNP21246 168 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 MSX1P28360 303 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 PTGDSP41222 190 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 SMSP52788 366 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 SNRPGP62308 76 aaKnown RBP12.85□□□□□ -0.35
SS18-201ENST00000269137 SNTA1Q13424 505 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 COL28A1Q2UY09 1125 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 RPL13AP3Q6NVV1 102 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 SLC27A4Q6P1M0 643 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 CASP12Q6UXS9 341 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 IL22RA1Q8N6P7 574 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 ASB15Q8WXK1 588 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 DPH1Q9BZG8 443 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 CPNE5Q9HCH3 593 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 DLL3Q9NYJ7 618 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 IL17BQ9UHF5 180 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 PCDHGB6Q9Y5F9 930 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 CHCHD2Q9Y6H1 151 aaPredicted RBP12.85□□□□□ -0.35
SS18-201ENST00000269137 PCSK5Q92824 1860 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 MPDZO75970 2070 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 IGKV1D-42A0A075B6H8 117 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 ANKUB1A6NFN9 424 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 EFCAB9A8MZ26 197 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 MAN1A2O60476 641 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 RCBTB2O95199 551 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 TFAP2AP05549 437 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 GP1BBP13224 206 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 ATP6V1B1P15313 513 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 TACR3P29371 465 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 FMO3P31513 532 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 CASP3P42574 277 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 RPL5P46777 297 aaKnown RBP12.85□□□□□ -0.35
SS18-201ENST00000269137 CDH15P55291 814 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 DLX5P56178 289 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 NHLH1Q02575 133 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 CRYZQ08257 329 aaKnown RBP12.85□□□□□ -0.35
SS18-201ENST00000269137 TOMM34Q15785 309 aaPredicted RBP12.85□□□□□ -0.35
SS18-201ENST00000269137 ACSM5Q6NUN0 579 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 JMJD6Q6NYC1 403 aaPredicted RBP12.85□□□□□ -0.35
SS18-201ENST00000269137 PTCHD4Q6ZW05 846 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 CCDC103Q8IW40 242 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 BPIFB6Q8NFQ5 453 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 OR8D4Q8NGM9 314 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 OR8J1Q8NGP2 316 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 DUSP21Q9H596 190 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 METTL7AQ9H8H3 244 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 PLCXD1Q9NUJ7 323 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 KLRF1Q9NZS2 232 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 AASSQ9UDR5 926 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 TPRKBQ9Y3C4 175 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 MRPS18BQ9Y676 258 aaKnown RBP12.85□□□□□ -0.35
SS18-201ENST00000269137 DOCK10Q96BY6 2186 aa12.85□□□□□ -0.35
SS18-201ENST00000269137 ENO4A6NNW6 628 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 MASP2O00187 686 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 PTP4A3O75365 173 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 NUDT14O95848 222 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 NR1H2P55055 460 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 EFNB1P98172 346 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 ATP1A4Q13733 1029 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 QPRTQ15274 297 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 BICRALQ6AI39 1079 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 FCRLBQ6BAA4 426 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 ZNF773Q6PK81 442 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 GRINAQ7Z429 371 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 P3H2Q8IVL5 708 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 SLC43A2Q8N370 569 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 IQCF1Q8N6M8 205 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 TMEM234Q8WY98 164 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 ST8SIA1Q92185 356 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 KIAA1143Q96AT1 154 aaPredicted RBP12.84□□□□□ -0.35
SS18-201ENST00000269137 NTNG2Q96CW9 530 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 SGTBQ96EQ0 304 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 FRMD6Q96NE9 622 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 TSSK6Q9BXA6 273 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 POLDIP3Q9BY77 421 aaKnown RBP12.84□□□□□ -0.35
SS18-201ENST00000269137 GPN2Q9H9Y4 310 aaPredicted RBP12.84□□□□□ -0.35
SS18-201ENST00000269137 GALNT9Q9HCQ5 603 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 SH2D2AQ9NP31 389 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 SCN3BQ9NY72 215 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 TAS2R10Q9NYW0 307 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 OSGIN1Q9UJX0 560 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 SIGLEC7Q9Y286 467 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 WIF1Q9Y5W5 379 aa12.84□□□□□ -0.35
SS18-201ENST00000269137 SH3D21A4FU49 640 aa12.83□□□□□ -0.35
SS18-201ENST00000269137 ETV2O00321 342 aaPredicted RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms