RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 DRD5P21918 477 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 RBMS1P29558 406 aaKnown RBP14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 SMIM11AP58511 58 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 FAM27D1Q5T7N8 215 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 HBMQ6B0K9 141 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 SLC27A4Q6P1M0 643 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 KLHL36Q8N4N3 616 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 ZNF527Q8NB42 609 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 CCL4L1Q8NHW4 92 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 SPRTNQ9H040 489 aaPredicted RBP14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 KLHL31Q9H511 634 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 MAN2C1Q9NTJ4 1040 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 COA4Q9NYJ1 87 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 AHSPQ9NZD4 102 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 GPR160Q9UJ42 338 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 CELSR3Q9NYQ7 3312 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 TMEM265A0A087WTH1 108 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 TRAV20A0A0B4J274 112 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 FAM170BA6NMN3 283 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 ABCD4O14678 606 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 KDM4BO94953 1096 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 SOX30O94993 753 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 OR5F1O95221 314 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 ALDOBP05062 364 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 DCNP07585 359 aaKnown RBP14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 FGF2P09038 288 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 H2AFB2P0C5Z0 115 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 SHC1P29353 583 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 MTFR2Q6P444 385 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 SFTPA2Q8IWL1 248 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 UXS1Q8NBZ7 420 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 TEX47Q8TBZ9 253 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 SLC22A8Q8TCC7 542 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 ADAMTS14Q8WXS8 1223 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 TSACCQ96A04 125 aaPredicted RBP14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 ISG20L2Q9H9L3 353 aaKnown RBP14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 NKIRAS2Q9NYR9 191 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 CBLCQ9ULV8 474 aa14.79□□□□□ -0.04
MAP1LC3B-201ENST00000268607 ARHGEF17Q96PE2 2063 aaPredicted RBP14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 A0A1W2PRQ8 180 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 FAM25EA8MYX2 175 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 SELENOFO60613 162 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 B4GALT2O60909 372 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 NTN1O95631 604 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 MT-ND4P03905 459 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 RPN2P04844 631 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 CEACAM5P06731 702 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 CXCL2P19875 107 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 THBS2P35442 1172 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 TRIM23P36406 574 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 RPS21P63220 83 aaKnown RBP14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 CSNK1G2P78368 415 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 TCTE1Q5JU00 501 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 CD300LDQ6UXZ3 194 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 UBE3DQ7Z6J8 389 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 PAQR7Q86WK9 346 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 ELMOD3Q96FG2 381 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 CAMK1GQ96NX5 476 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 ZNF649Q9BS31 505 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 A4GALTQ9NPC4 353 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 PHPT1Q9NRX4 125 aaPredicted RBP14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 SCN3AQ9NY46 2000 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 GAAP10253 952 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 ERGP11308 486 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 ATP6V1E1P36543 226 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 BLVRAP53004 296 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 SYPL1Q16563 259 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 C1orf94Q6P1W5 598 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 FAM198BQ6UWH4 519 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 MORN4Q8NDC4 146 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 BBS1Q8NFJ9 593 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 ZFP3Q96NJ6 502 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 AICDAQ9GZX7 198 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 RHBGQ9H310 441 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 ZNF768Q9H5H4 540 aaKnown RBP14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 ASB6Q9NWX5 421 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 ACTR10Q9NZ32 417 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 MMP17Q9ULZ9 603 aa14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 SIRT4Q9Y6E7 314 aaPredicted RBP14.78□□□□□ -0.04
MAP1LC3B-201ENST00000268607 CHST10O43529 356 aa14.77□□□□□ -0.04
MAP1LC3B-201ENST00000268607 SLC28A2O43868 658 aa14.77□□□□□ -0.04
MAP1LC3B-201ENST00000268607 APOC1P02654 83 aa14.77□□□□□ -0.04
MAP1LC3B-201ENST00000268607 ANKRD34CP0C6C1 535 aa14.77□□□□□ -0.04
MAP1LC3B-201ENST00000268607 DRD2P14416 443 aa14.77□□□□□ -0.04
MAP1LC3B-201ENST00000268607 NPR2P20594 1047 aa14.77□□□□□ -0.04
MAP1LC3B-201ENST00000268607 AK4P27144 223 aaPredicted RBP14.77□□□□□ -0.04
MAP1LC3B-201ENST00000268607 RPL3P39023 403 aaKnown RBP14.77□□□□□ -0.04
MAP1LC3B-201ENST00000268607 DGCR2P98153 550 aa14.77□□□□□ -0.04
MAP1LC3B-201ENST00000268607 DEFA5Q01523 94 aa14.77□□□□□ -0.04
MAP1LC3B-201ENST00000268607 NDUFA9Q16795 377 aa14.77□□□□□ -0.04
MAP1LC3B-201ENST00000268607 LSRQ86X29 649 aaPredicted RBP14.77□□□□□ -0.04
MAP1LC3B-201ENST00000268607 POGLUT1Q8NBL1 392 aa14.77□□□□□ -0.04
MAP1LC3B-201ENST00000268607 OR2A1Q8NGT9 310 aa14.77□□□□□ -0.04
MAP1LC3B-201ENST00000268607 NECAB3Q96P71 396 aaPredicted RBP14.77□□□□□ -0.04
MAP1LC3B-201ENST00000268607 DMRTA2Q96SC8 542 aa14.77□□□□□ -0.04
MAP1LC3B-201ENST00000268607 MED9Q9NWA0 146 aa14.77□□□□□ -0.04
MAP1LC3B-201ENST00000268607 A0A1W2PPC1 479 aa14.77□□□□□ -0.05
MAP1LC3B-201ENST00000268607 KDM4EB2RXH2 506 aaPredicted RBP14.77□□□□□ -0.05
MAP1LC3B-201ENST00000268607 AIPO00170 330 aa14.77□□□□□ -0.05
MAP1LC3B-201ENST00000268607 HMGN4O00479 90 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms