RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 ZNF500O60304 480 aaPredicted RBP8.64□□□□□ -1.03
VPS41-201ENST00000265745 BCAS1O75363 584 aaPredicted RBP8.64□□□□□ -1.03
VPS41-201ENST00000265745 CYP7B1O75881 506 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 CPSF4O95639 269 aaKnown RBP8.64□□□□□ -1.03
VPS41-201ENST00000265745 AGR2O95994 175 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 UBTFL6P0CB48 400 aaPredicted RBP8.64□□□□□ -1.03
VPS41-201ENST00000265745 SLC7A1P30825 629 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 PGM1P36871 562 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 CCR4P51679 360 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 CLNS1AP54105 237 aaKnown RBP8.64□□□□□ -1.03
VPS41-201ENST00000265745 TNP2Q05952 138 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 BST1Q10588 318 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 P2RY6Q15077 328 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 SPANXN4Q5MJ08 99 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 Q5PR19 223 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 SFRP5Q5T4F7 317 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 ATAD3BQ5T9A4 648 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 SAXO2Q658L1 398 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 TYW3Q6IPR3 259 aaKnown RBP8.64□□□□□ -1.03
VPS41-201ENST00000265745 OGFOD2Q6N063 350 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 TNFAIP8L2Q6P589 184 aaPredicted RBP8.64□□□□□ -1.03
VPS41-201ENST00000265745 ZNF704Q6ZNC4 412 aaPredicted RBP8.64□□□□□ -1.03
VPS41-201ENST00000265745 PLEKHM3Q6ZWE6 761 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 EIF3MQ7L2H7 374 aaKnown RBP8.64□□□□□ -1.03
VPS41-201ENST00000265745 C16orf62Q7Z3J2 963 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 WFDC8Q8IUA0 241 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 TMCO5AQ8N6Q1 288 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 FAM71CQ8NEG0 241 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 OIT3Q8WWZ8 545 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 ST8SIA1Q92185 356 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 RAB8BQ92930 207 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 ARL8AQ96BM9 186 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 S100PBPQ96BU1 408 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 ZBTB9Q96C00 473 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 NEURL3Q96EH8 262 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 PLPPR2Q96GM1 343 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 SLC35G5Q96KT7 338 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 TEX37Q96LM6 180 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 QRSL1Q9H0R6 528 aaKnown RBP8.64□□□□□ -1.03
VPS41-201ENST00000265745 CENPHQ9H3R5 247 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 PIF1Q9H611 641 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 POLE3Q9NRF9 147 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 SERINC1Q9NRX5 453 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 ACER3Q9NUN7 267 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 KLHL9Q9P2J3 617 aa8.64□□□□□ -1.03
VPS41-201ENST00000265745 IGHV3-15A0A0B4J1V0 119 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 PRAMEF27A3QJZ7 478 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 E9PBE3 544 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 H6PDO95479 791 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 PLAUP00749 431 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 ADAP00813 363 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 C1QCP02747 245 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 PAX1P15863 534 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 PGCP20142 388 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 ADSLP30566 484 aaPredicted RBP8.63□□□□□ -1.03
VPS41-201ENST00000265745 S100A3P33764 101 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 SMCPP49901 116 aaPredicted RBP8.63□□□□□ -1.03
VPS41-201ENST00000265745 UFM1P61960 85 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 KCNJ10P78508 379 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 FUT5Q11128 374 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 MERTKQ12866 999 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 ITGADQ13349 1161 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 TSC22D1Q15714 1073 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 DPY19L1Q2PZI1 675 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 FAM174BQ3ZCQ3 159 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 C3orf33Q6P1S2 294 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 FRRS1Q6ZNA5 592 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 TMPPEQ6ZT21 453 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 YTHDF3Q7Z739 585 aaKnown RBP8.63□□□□□ -1.03
VPS41-201ENST00000265745 CROCCP2Q86T23 111 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 CIARTQ8N365 385 aaPredicted RBP8.63□□□□□ -1.03
VPS41-201ENST00000265745 TMEM234Q8WY98 164 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 HSD17B8Q92506 261 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 ZNF75CPQ92670 426 aaPredicted RBP8.63□□□□□ -1.03
VPS41-201ENST00000265745 ROPN1LQ96C74 230 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 PERPQ96FX8 193 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 CCDC115Q96NT0 180 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 OR5B2Q96R09 309 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 PAIP2Q9BPZ3 127 aaKnown RBP8.63□□□□□ -1.03
VPS41-201ENST00000265745 PSD2Q9BQI7 771 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 SLC35A5Q9BS91 424 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 TACO1Q9BSH4 297 aaKnown RBP8.63□□□□□ -1.03
VPS41-201ENST00000265745 CCDC106Q9BWC9 280 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 BTNL2Q9UIR0 455 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 SLC35A3Q9Y2D2 325 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 WDR45Q9Y484 360 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 PCNX3Q9H6A9 2034 aa8.63□□□□□ -1.03
VPS41-201ENST00000265745 VPS13CQ709C8 3753 aa8.62□□□□□ -1.03
VPS41-201ENST00000265745 ABCA2Q9BZC7 2435 aa8.62□□□□□ -1.03
VPS41-201ENST00000265745 CCDC154A6NI56 674 aa8.62□□□□□ -1.03
VPS41-201ENST00000265745 ZNF724A8MTY0 619 aa8.62□□□□□ -1.03
VPS41-201ENST00000265745 C9JVG2 144 aa8.62□□□□□ -1.03
VPS41-201ENST00000265745 H7C1Q1 480 aa8.62□□□□□ -1.03
VPS41-201ENST00000265745 HMGN4O00479 90 aa8.62□□□□□ -1.03
VPS41-201ENST00000265745 SDHDO14521 159 aa8.62□□□□□ -1.03
VPS41-201ENST00000265745 HS3ST1O14792 307 aa8.62□□□□□ -1.03
VPS41-201ENST00000265745 SMAD9O15198 467 aaKnown RBP8.62□□□□□ -1.03
VPS41-201ENST00000265745 CYTIPO60759 359 aa8.62□□□□□ -1.03
VPS41-201ENST00000265745 TMCC2O75069 709 aa8.62□□□□□ -1.03
VPS41-201ENST00000265745 ADAM11O75078 769 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms