RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 TUBA1CQ9BQE3 449 aa8.56□□□□□ -1.04
SSR3-201ENST00000265044 MND1Q9BWT6 205 aa8.56□□□□□ -1.04
SSR3-201ENST00000265044 ZNF160Q9HCG1 818 aa8.56□□□□□ -1.04
SSR3-201ENST00000265044 HHATLQ9HCP6 504 aa8.56□□□□□ -1.04
SSR3-201ENST00000265044 ACOT13Q9NPJ3 140 aa8.56□□□□□ -1.04
SSR3-201ENST00000265044 C20orf141Q9NUB4 165 aa8.56□□□□□ -1.04
SSR3-201ENST00000265044 MED11Q9P086 117 aa8.56□□□□□ -1.04
SSR3-201ENST00000265044 PSORS1C1Q9UIG5 152 aa8.56□□□□□ -1.04
SSR3-201ENST00000265044 PCDHGA10Q9Y5H3 936 aa8.56□□□□□ -1.04
SSR3-201ENST00000265044 CEPT1Q9Y6K0 416 aa8.56□□□□□ -1.04
SSR3-201ENST00000265044 VSTM2BA6NLU5 285 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 ARHGEF9O43307 516 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 FGFBP1Q14512 234 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 CRTC2Q53ET0 693 aaPredicted RBP8.55□□□□□ -1.04
SSR3-201ENST00000265044 LIPKQ5VXJ0 399 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 C6orf15Q6UXA7 325 aaPredicted RBP8.55□□□□□ -1.04
SSR3-201ENST00000265044 ZFP41Q8N8Y5 198 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 KBTBD8Q8NFY9 601 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 GATAD2BQ8WXI9 593 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 ASPNQ9BXN1 380 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 CHRNA10Q9GZZ6 450 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 FAM86C1Q9NVL1 165 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 ZNF226Q9NYT6 803 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 KCNE5Q9UJ90 142 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 PCDHGA5Q9Y5G8 931 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 FMO6PO60774 539 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 ZIC2O95409 532 aaPredicted RBP8.55□□□□□ -1.04
SSR3-201ENST00000265044 RENP00797 406 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 HTR2AP28223 471 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 SFTPDP35247 375 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 GABRA4P48169 554 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 ALG10Q5BKT4 473 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 FOXB2Q5VYV0 432 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 ERI1Q8IV48 349 aaKnown RBP8.55□□□□□ -1.04
SSR3-201ENST00000265044 NAXDQ8IW45 347 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 KLHL36Q8N4N3 616 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 TMEM163Q8TC26 289 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 PITX2Q99697 317 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 EXO5Q9H790 373 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 DNAJB12Q9NXW2 375 aaKnown RBP8.55□□□□□ -1.04
SSR3-201ENST00000265044 NTMQ9P121 344 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 ABI3Q9P2A4 366 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 ARRDC5A6NEK1 342 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 J3QLW9 94 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 WBP4O75554 376 aaKnown RBP8.55□□□□□ -1.04
SSR3-201ENST00000265044 RFPL3O75679 317 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 SLC2A10O95528 541 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 ZNF19P17023 458 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 CELP19835 753 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 CAPZA2P47755 286 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 INPP1P49441 399 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 RPS18P62269 152 aaKnown RBP8.55□□□□□ -1.04
SSR3-201ENST00000265044 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.55□□□□□ -1.04
SSR3-201ENST00000265044 RAET1LQ5VY80 246 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 ARHGAP11AQ6P4F7 1023 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 GID4Q8IVV7 300 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 SIRT6Q8N6T7 355 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 ZNF615Q8N8J6 731 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 PLPP5Q8NEB5 264 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 OR4F15Q8NGB8 312 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 MCFD2Q8NI22 146 aa8.55□□□□□ -1.04
SSR3-201ENST00000265044 ABTB1Q969K4 478 aaPredicted RBP8.55□□□□□ -1.04
SSR3-201ENST00000265044 A6NL46 340 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 TMEM229AB2RXF0 380 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 SLC30A4O14863 429 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 BCAS1O75363 584 aaPredicted RBP8.54□□□□□ -1.04
SSR3-201ENST00000265044 S1PR1P21453 382 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 CALRP27797 417 aaKnown RBP8.54□□□□□ -1.04
SSR3-201ENST00000265044 EVI2BP34910 448 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 AQP2P41181 271 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 PNLIPRP2P54317 469 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 RAB15P59190 212 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 C17orf67Q0P5P2 114 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 QPRTQ15274 297 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 CD226Q15762 336 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 INAQ16352 499 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 ZNF791Q3KP31 576 aaPredicted RBP8.54□□□□□ -1.04
SSR3-201ENST00000265044 ZNF620Q6ZNG0 422 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 C9orf40Q8IXQ3 194 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 ZNF420Q8TAQ5 688 aaPredicted RBP8.54□□□□□ -1.04
SSR3-201ENST00000265044 ZNF285Q96NJ3 590 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 CDCP1Q9H5V8 836 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 GALNT9Q9HCQ5 603 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 MUC6Q6W4X9 2439 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 SAGE2PA6NJ88 616 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 OR6C76A6NM76 312 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 CCRL2O00421 344 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 SEMA7AO75326 666 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 MAKP20794 623 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 CASRP41180 1078 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 ALDH3B2P48448 385 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 ZNF136P52737 540 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 TMBIM6P55061 237 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 NCS1P62166 190 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 RHAGQ02094 409 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 COL28A1Q2UY09 1125 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 LAIR1Q6GTX8 287 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 TMEM225Q6GV28 225 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 LEG1Q6P5S2 330 aa8.54□□□□□ -1.04
SSR3-201ENST00000265044 OPN5Q6U736 354 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms