RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 NCCRP1Q6ZVX7 275 aaPredicted RBP16.57■□□□□ 0.24
SDF4-201ENST00000263741 TIMP4Q99727 224 aa16.57■□□□□ 0.24
SDF4-201ENST00000263741 ALKBH4Q9NXW9 302 aa16.57■□□□□ 0.24
SDF4-201ENST00000263741 CAMK2AQ9UQM7 478 aa16.57■□□□□ 0.24
SDF4-201ENST00000263741 MRPS18CQ9Y3D5 142 aaKnown RBP16.57■□□□□ 0.24
SDF4-201ENST00000263741 USP9XQ93008 2570 aaPredicted RBP16.56■□□□□ 0.24
SDF4-201ENST00000263741 DOCK7Q96N67 2140 aa16.56■□□□□ 0.24
SDF4-201ENST00000263741 J3QKU1 62 aa16.56■□□□□ 0.24
SDF4-201ENST00000263741 SEC14L5O43304 696 aa16.56■□□□□ 0.24
SDF4-201ENST00000263741 PGCP20142 388 aa16.56■□□□□ 0.24
SDF4-201ENST00000263741 ME2P23368 584 aa16.56■□□□□ 0.24
SDF4-201ENST00000263741 PSMA4P25789 261 aaKnown RBP16.56■□□□□ 0.24
SDF4-201ENST00000263741 ACAA2P42765 397 aaKnown RBP16.56■□□□□ 0.24
SDF4-201ENST00000263741 CHN2P52757 468 aa16.56■□□□□ 0.24
SDF4-201ENST00000263741 EPS8Q12929 822 aa16.56■□□□□ 0.24
SDF4-201ENST00000263741 PDK3Q15120 406 aa16.56■□□□□ 0.24
SDF4-201ENST00000263741 FOXB2Q5VYV0 432 aa16.56■□□□□ 0.24
SDF4-201ENST00000263741 CCDC80Q76M96 950 aa16.56■□□□□ 0.24
SDF4-201ENST00000263741 LACC1Q8IV20 430 aa16.56■□□□□ 0.24
SDF4-201ENST00000263741 CADM2Q8N3J6 435 aa16.56■□□□□ 0.24
SDF4-201ENST00000263741 GTPBP8Q8N3Z3 284 aaPredicted RBP16.56■□□□□ 0.24
SDF4-201ENST00000263741 ATP6V1C2Q8NEY4 427 aa16.56■□□□□ 0.24
SDF4-201ENST00000263741 VANGL1Q8TAA9 524 aaPredicted RBP16.56■□□□□ 0.24
SDF4-201ENST00000263741 FAM57AQ8TBR7 257 aa16.56■□□□□ 0.24
SDF4-201ENST00000263741 ZBTB8AQ96BR9 441 aa16.56■□□□□ 0.24
SDF4-201ENST00000263741 NDUFA13Q9P0J0 144 aa16.56■□□□□ 0.24
SDF4-201ENST00000263741 ZNF835Q9Y2P0 537 aa16.56■□□□□ 0.24
SDF4-201ENST00000263741 MED12LQ86YW9 2145 aa16.56■□□□□ 0.24
SDF4-201ENST00000263741 A0A087WZY1 265 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 KDM4EB2RXH2 506 aaPredicted RBP16.55■□□□□ 0.24
SDF4-201ENST00000263741 DNAJA2O60884 412 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 POU3F2P20265 443 aaPredicted RBP16.55■□□□□ 0.24
SDF4-201ENST00000263741 KDELR2P33947 212 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 LHX2P50458 406 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 CLDN20P56880 219 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 DYNC1I2Q13409 638 aaKnown RBP16.55■□□□□ 0.24
SDF4-201ENST00000263741 ZNF585AQ6P3V2 769 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 GRAMD2AQ8IUY3 354 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 RPRMLQ8N4K4 120 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 OR4D11Q8NGI4 311 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 SARAFQ96BY9 339 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 PIGQQ9BRB3 760 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 PINK1Q9BXM7 581 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 HHATLQ9HCP6 504 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 VCX3AQ9NNX9 186 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 EFNA2O43921 213 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 SHC1P29353 583 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 KCNJ5P48544 419 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 RGS8P57771 180 aaPredicted RBP16.55■□□□□ 0.24
SDF4-201ENST00000263741 GXYLT1Q4G148 440 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 CYBRD1Q53TN4 286 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 SAMD4BQ5PRF9 694 aaKnown RBP16.55■□□□□ 0.24
SDF4-201ENST00000263741 DOLPP1Q86YN1 238 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 RBM45Q8IUH3 476 aaKnown RBP16.55■□□□□ 0.24
SDF4-201ENST00000263741 DTNBP1Q96EV8 351 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 DNAJA3Q96EY1 480 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 PCDHAC1Q9H158 963 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 CD300AQ9UGN4 299 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 SLC13A4Q9UKG4 626 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 RAB26Q9ULW5 256 aa16.55■□□□□ 0.24
SDF4-201ENST00000263741 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 OR14I1A6ND48 311 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 TMEM229AB2RXF0 380 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 ZNF17P17021 662 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 GGT1P19440 569 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 HTR2AP28223 471 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 SLC6A8P48029 635 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 ZNF136P52737 540 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 CLDN18P56856 261 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 MERTKQ12866 999 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 NHSL2Q5HYW2 709 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 WDYHV1Q96HA8 205 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 TPD52L3Q96J77 140 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 ARMC7Q9H6L4 198 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 CTPS2Q9NRF8 586 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 SMIM31A0A1B0GVY4 71 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 PRRG2O14669 202 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 NTN1O95631 604 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 ACTL6AO96019 429 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 CCNA2P20248 432 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 CHMP24386 653 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 SFTPDP35247 375 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 FJX1Q86VR8 437 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 MARVELD2Q8N4S9 558 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 FAM162AQ96A26 154 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 V9GYQ6 96 aa16.54■□□□□ 0.24
SDF4-201ENST00000263741 C7orf72A4D263 438 aa16.53■□□□□ 0.24
SDF4-201ENST00000263741 BCKDKO14874 412 aa16.53■□□□□ 0.24
SDF4-201ENST00000263741 TPST2O60704 377 aa16.53■□□□□ 0.24
SDF4-201ENST00000263741 ZNF682O95780 498 aa16.53■□□□□ 0.24
SDF4-201ENST00000263741 SERPINA1P01009 418 aa16.53■□□□□ 0.24
SDF4-201ENST00000263741 GP1BBP13224 206 aa16.53■□□□□ 0.24
SDF4-201ENST00000263741 HSD17B1P14061 328 aa16.53■□□□□ 0.24
SDF4-201ENST00000263741 HTR1EP28566 365 aa16.53■□□□□ 0.24
SDF4-201ENST00000263741 SUCLG1P53597 346 aaKnown RBP16.53■□□□□ 0.24
SDF4-201ENST00000263741 CLDN15P56746 228 aa16.53■□□□□ 0.24
SDF4-201ENST00000263741 NPTX1Q15818 432 aa16.53■□□□□ 0.24
SDF4-201ENST00000263741 Q6ZPB1 254 aaPredicted RBP16.53■□□□□ 0.24
SDF4-201ENST00000263741 PLEKHM3Q6ZWE6 761 aa16.53■□□□□ 0.24
SDF4-201ENST00000263741 ZNF550Q7Z398 422 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms