RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 ELOA3Q8NG57 546 aa20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 TEX47Q8TBZ9 253 aa20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 TMEM43Q9BTV4 400 aa20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 ADNPQ9H2P0 1102 aa20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 WIF1Q9Y5W5 379 aa20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 CDH10Q9Y6N8 788 aa20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 AHCTF1Q8WYP5 2266 aa20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 C2orf72A6NCS6 295 aa20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 ANKUB1A6NFN9 424 aa20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 SLC1A7O00341 560 aa20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 CDC40O60508 579 aaKnown RBP eCLIP20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 SMNDC1O75940 238 aaKnown RBP eCLIP20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 NUDT14O95848 222 aa20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 LIPCP11150 499 aa20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 TACR3P29371 465 aa20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 GIPRP48546 466 aa20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 CXCR4P61073 352 aa20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 CAMK2BQ13554 666 aa20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 GINS1Q14691 196 aa20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 QPRTQ15274 297 aa20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 PSMF1Q92530 271 aa20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 KIAA1143Q96AT1 154 aaPredicted RBP20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 MRPS26Q9BYN8 205 aaKnown RBP20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 SH2D2AQ9NP31 389 aa20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 BATF3Q9NR55 127 aa20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 SDHAF3Q9NRP4 125 aa20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 IMPAD1Q9NX62 359 aa20.84■□□□□ 0.93
SMARCB1-201ENST00000263121 ENO4A6NNW6 628 aa20.83■□□□□ 0.93
SMARCB1-201ENST00000263121 IGF2P01344 180 aa20.83■□□□□ 0.93
SMARCB1-201ENST00000263121 CCDC159P0C7I6 412 aa20.83■□□□□ 0.93
SMARCB1-201ENST00000263121 GP1BBP13224 206 aa20.83■□□□□ 0.93
SMARCB1-201ENST00000263121 ST13P50502 369 aaKnown RBP20.83■□□□□ 0.93
SMARCB1-201ENST00000263121 TEKQ02763 1124 aa20.83■□□□□ 0.93
SMARCB1-201ENST00000263121 CRYZQ08257 329 aaKnown RBP20.83■□□□□ 0.93
SMARCB1-201ENST00000263121 SNTA1Q13424 505 aa20.83■□□□□ 0.93
SMARCB1-201ENST00000263121 OR5M10Q6IEU7 315 aa20.83■□□□□ 0.93
SMARCB1-201ENST00000263121 JMJD6Q6NYC1 403 aaPredicted RBP20.83■□□□□ 0.93
SMARCB1-201ENST00000263121 IQCF1Q8N6M8 205 aa20.83■□□□□ 0.93
SMARCB1-201ENST00000263121 BRIX1Q8TDN6 353 aaKnown RBP20.83■□□□□ 0.93
SMARCB1-201ENST00000263121 OSTF1Q92882 214 aa20.83■□□□□ 0.93
SMARCB1-201ENST00000263121 NTNG2Q96CW9 530 aa20.83■□□□□ 0.93
SMARCB1-201ENST00000263121 CPNE5Q9HCH3 593 aa20.83■□□□□ 0.93
SMARCB1-201ENST00000263121 TAS2R10Q9NYW0 307 aa20.83■□□□□ 0.93
SMARCB1-201ENST00000263121 HRH3Q9Y5N1 445 aa20.83■□□□□ 0.93
SMARCB1-201ENST00000263121 FAM186AA6NE01 2351 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 EFCAB9A8MZ26 197 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 M0R129 80 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 LIFP15018 202 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 FUT1P19526 365 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 MSX1P28360 303 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 FMO3P31513 532 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 HLCSP50747 726 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 SMSP52788 366 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 CDH15P55291 814 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 FXYD6P3P58550 94 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 RTP5Q14D33 572 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 DCAF10Q5QP82 559 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 B3GNTL1Q67FW5 361 aaPredicted RBP20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 CCDC103Q8IW40 242 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 TMEM156Q8N614 296 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 SIRT6Q8N6T7 355 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 FRMD6Q96NE9 622 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 PPP4R1LQ9P1A2 415 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 OSGIN1Q9UJX0 560 aa20.83■□□□□ 0.92
SMARCB1-201ENST00000263121 HTR3EA5X5Y0 456 aa20.82■□□□□ 0.92
SMARCB1-201ENST00000263121 TRIM64CA6NLI5 447 aa20.82■□□□□ 0.92
SMARCB1-201ENST00000263121 DLL1O00548 723 aa20.82■□□□□ 0.92
SMARCB1-201ENST00000263121 MPZL2O60487 215 aa20.82■□□□□ 0.92
SMARCB1-201ENST00000263121 GFRA3O60609 400 aa20.82■□□□□ 0.92
SMARCB1-201ENST00000263121 DLX5P56178 289 aa20.82■□□□□ 0.92
SMARCB1-201ENST00000263121 ACSM5Q6NUN0 579 aa20.82■□□□□ 0.92
SMARCB1-201ENST00000263121 SLC27A4Q6P1M0 643 aa20.82■□□□□ 0.92
SMARCB1-201ENST00000263121 OR13C2Q8NGS9 318 aa20.82■□□□□ 0.92
SMARCB1-201ENST00000263121 PAQR8Q8TEZ7 354 aa20.82■□□□□ 0.92
SMARCB1-201ENST00000263121 SGTBQ96EQ0 304 aa20.82■□□□□ 0.92
SMARCB1-201ENST00000263121 THOC3Q96J01 351 aaKnown RBP20.82■□□□□ 0.92
SMARCB1-201ENST00000263121 HHATLQ9HCP6 504 aa20.82■□□□□ 0.92
SMARCB1-201ENST00000263121 TBC1D23Q9NUY8 699 aa20.82■□□□□ 0.92
SMARCB1-201ENST00000263121 HPF1Q9NWY4 346 aa20.82■□□□□ 0.92
SMARCB1-201ENST00000263121 MED11Q9P086 117 aa20.82■□□□□ 0.92
SMARCB1-201ENST00000263121 BLOC1S6Q9UL45 172 aa20.82■□□□□ 0.92
SMARCB1-201ENST00000263121 SIGLEC7Q9Y286 467 aa20.82■□□□□ 0.92
SMARCB1-201ENST00000263121 SAGP10523 405 aaPredicted RBP20.81■□□□□ 0.92
SMARCB1-201ENST00000263121 GABARAPL2P60520 117 aa20.81■□□□□ 0.92
SMARCB1-201ENST00000263121 EGR4Q05215 589 aa20.81■□□□□ 0.92
SMARCB1-201ENST00000263121 SMN1Q16637 294 aaKnown RBP20.81■□□□□ 0.92
SMARCB1-201ENST00000263121 ACER2Q5QJU3 275 aa20.81■□□□□ 0.92
SMARCB1-201ENST00000263121 ZNF468Q5VIY5 522 aaPredicted RBP20.81■□□□□ 0.92
SMARCB1-201ENST00000263121 SLC30A6Q6NXT4 461 aa20.81■□□□□ 0.92
SMARCB1-201ENST00000263121 CASP12Q6UXS9 341 aa20.81■□□□□ 0.92
SMARCB1-201ENST00000263121 GRINAQ7Z429 371 aa20.81■□□□□ 0.92
SMARCB1-201ENST00000263121 BPIFB6Q8NFQ5 453 aa20.81■□□□□ 0.92
SMARCB1-201ENST00000263121 FANK1Q8TC84 345 aa20.81■□□□□ 0.92
SMARCB1-201ENST00000263121 ST8SIA1Q92185 356 aa20.81■□□□□ 0.92
SMARCB1-201ENST00000263121 TSSK6Q9BXA6 273 aa20.81■□□□□ 0.92
SMARCB1-201ENST00000263121 OR52D1Q9H346 318 aa20.81■□□□□ 0.92
SMARCB1-201ENST00000263121 TUBA8Q9NY65 449 aaPredicted RBP20.81■□□□□ 0.92
SMARCB1-201ENST00000263121 PCDHGB6Q9Y5F9 930 aa20.81■□□□□ 0.92
SMARCB1-201ENST00000263121 PTP4A3O75365 173 aa20.8■□□□□ 0.92
SMARCB1-201ENST00000263121 WISP1O95388 367 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms