RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 UPB1Q9UBR1 384 aa10.86□□□□□ -0.67
TRAF4-202ENST00000262396 MARCOQ9UEW3 520 aaPredicted RBP10.86□□□□□ -0.67
TRAF4-202ENST00000262396 LGALS13Q9UHV8 139 aa10.86□□□□□ -0.67
TRAF4-202ENST00000262396 PRSS51A0A1B0GVH4 220 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 ZNF724A8MTY0 619 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 ABCD4O14678 606 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 SMAD9O15198 467 aaKnown RBP10.85□□□□□ -0.67
TRAF4-202ENST00000262396 FCMRO60667 390 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 RAD51DO75771 328 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 UGT2B17O75795 530 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 IGHV3-9P01782 118 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 PAX1P15863 534 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 FKBP2P26885 142 aaKnown RBP10.85□□□□□ -0.67
TRAF4-202ENST00000262396 S100A3P33764 101 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 NUDT6P53370 316 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 CLNS1AP54105 237 aaKnown RBP10.85□□□□□ -0.67
TRAF4-202ENST00000262396 ABCE1P61221 599 aaKnown RBP10.85□□□□□ -0.67
TRAF4-202ENST00000262396 VSNL1P62760 191 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 ZNF141Q15928 474 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 SMU1Q2TAY7 513 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 SLC25A53Q5H9E4 307 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 TIMM23BQ5SRD1 257 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 EMBQ6PCB8 327 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 TMEM108Q6UXF1 575 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 MTDHQ86UE4 582 aaKnown RBP10.85□□□□□ -0.67
TRAF4-202ENST00000262396 P2RY8Q86VZ1 359 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 RIMKLAQ8IXN7 391 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 OR52N5Q8NH56 324 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 PIGXQ8TBF5 258 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 NEUROG1Q92886 237 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 ROPN1LQ96C74 230 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 DDIT4LQ96D03 193 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 RADILQ96JH8 1075 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 ZIM3Q96PE6 472 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 ZBTB18Q99592 522 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 NAA11Q9BSU3 229 aaPredicted RBP10.85□□□□□ -0.67
TRAF4-202ENST00000262396 REG4Q9BYZ8 158 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 AKTIPQ9H8T0 292 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 POLE3Q9NRF9 147 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 YAE1D1Q9NRH1 226 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 ASB6Q9NWX5 421 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 CHRNA9Q9UGM1 479 aa10.85□□□□□ -0.67
TRAF4-202ENST00000262396 MAGED1Q9Y5V3 778 aaPredicted RBP10.85□□□□□ -0.67
TRAF4-202ENST00000262396 PCNX3Q9H6A9 2034 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 ZNF814B7Z6K7 855 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 NPIPB9F8W1W9 429 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 M0R1B8 84 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 SSX4O60224 188 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 KRT33AO76009 404 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 SNUPNO95149 360 aaKnown RBP10.84□□□□□ -0.67
TRAF4-202ENST00000262396 H6PDO95479 791 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 IFNA2P01563 188 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 SOD3P08294 240 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 BMP4P12644 408 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 LBPP18428 481 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 ACVR1BP36896 505 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 HTR3AP46098 478 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 SLC1A6P48664 564 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 RPL14P50914 215 aaKnown RBP10.84□□□□□ -0.67
TRAF4-202ENST00000262396 ZNF83P51522 516 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 NME5P56597 212 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 C21orf58P58505 322 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 SKP2Q13309 424 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 DPY19L1Q2PZI1 675 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 FBXW9Q5XUX1 488 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 KLHL24Q6TFL4 600 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 CASP12Q6UXS9 341 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 OLIG3Q7RTU3 272 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 GRINAQ7Z429 371 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 FBXL14Q8N1E6 418 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 ZNF781Q8N8C0 355 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 SLC35A5Q9BS91 424 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 ZNF350Q9GZX5 532 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 CTPS2Q9NRF8 586 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 MGAT4BQ9UQ53 548 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 HDGFL3Q9Y3E1 203 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 RAP2CQ9Y3L5 183 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 HIVEP2P31629 2446 aa10.84□□□□□ -0.67
TRAF4-202ENST00000262396 DPRXA6NFQ7 191 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 OR5H1A6NKK0 313 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 KIAA0513O60268 411 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 DHRS4L1P0CG22 281 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 NR2F1P10589 423 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 CREB1P16220 341 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 IL7RP16871 459 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 IGHV1-2P23083 117 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 IDH2P48735 452 aaKnown RBP10.83□□□□□ -0.68
TRAF4-202ENST00000262396 FABP6P51161 128 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 TGFBR3Q03167 851 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 STX3Q13277 289 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 RAB35Q15286 201 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 NRF1Q16656 503 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 CLEC2AQ6UVW9 174 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 ZNF621Q6ZSS3 439 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 HMGN2P46Q86SG4 172 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 OR8J2Q8NGG1 315 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 OIT3Q8WWZ8 545 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 PMM1Q92871 262 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 PANX1Q96RD7 426 aa10.83□□□□□ -0.68
TRAF4-202ENST00000262396 NUF2Q9BZD4 464 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms