RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 TFECO14948 347 aaPredicted RBP14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 HNRNPRO43390 633 aaKnown RBP14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 IL11P20809 199 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 RRM2P31350 389 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 B3GALT5-AS1P59052 145 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 SPIBQ01892 262 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 MERTKQ12866 999 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 TMEM44Q2T9K0 475 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 RAET1LQ5VY80 246 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 OR2T5Q6IEZ7 315 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 POMZP3Q6PJE2 187 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 WDR88Q6ZMY6 472 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 LILRA2Q8N149 483 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 GTPBP8Q8N3Z3 284 aaPredicted RBP14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 PIK3C3Q8NEB9 887 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 OR2T29Q8NH02 315 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 DNAJA4Q8WW22 397 aaPredicted RBP14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 LRTOMTQ8WZ04 291 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 WBP1Q96G27 269 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 DHRS1Q96LJ7 313 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 PRSS27Q9BQR3 290 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 FNDC11Q9BVV2 318 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 TSPAN10Q9H1Z9 355 aaPredicted RBP14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 VNN3Q9NY84 501 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 MED12Q93074 2177 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 FREM3P0C091 2139 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 OR2M5A3KFT3 312 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 C7orf72A4D263 438 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 CHP2O43745 196 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 EFNA2O43921 213 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 WISP2O76076 250 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 ST3GAL3Q11203 375 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 KLRB1Q12918 225 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 PPP1R8Q12972 351 aaKnown RBP14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 GLYR1Q49A26 553 aaPredicted RBP14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 CMPK2Q5EBM0 449 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 HMBOX1Q6NT76 420 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 ADGRG3Q86Y34 549 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 NKAIN4Q8IVV8 208 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 OR52J3Q8NH60 311 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 RNF217Q8TC41 542 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 NR4A3Q92570 626 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 SLC38A4Q969I6 547 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 DEFB127Q9H1M4 99 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 SLC6A15Q9H2J7 730 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 AGPAT4Q9NRZ5 378 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 LIPGQ9Y5X9 500 aa14.3□□□□□ -0.12
CCDC90B-201ENST00000260054 H0Y3Z8 333 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 ADAMDEC1O15204 470 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 CLOCKO15516 846 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 H1F0P07305 194 aaKnown RBP14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 THRBP10828 461 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 ZNF17P17021 662 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 FASP25445 335 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 ADH6P28332 368 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 IFNA8P32881 189 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 EIF1P41567 113 aaKnown RBP14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 HTR3AP46098 478 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 POLR2HP52434 150 aaKnown RBP14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 ALDH6A1Q02252 535 aaKnown RBP14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 SLC10A1Q14973 349 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 ATP6AP1Q15904 470 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 LINC00114Q6XXX2 140 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 AMIGO2Q86SJ2 522 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 SIAH3Q8IW03 269 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 DTNBP1Q96EV8 351 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 PKP2Q99959 881 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 PIGQQ9BRB3 760 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 NTN4Q9HB63 628 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 ACKR4Q9NPB9 350 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 DNAJB9Q9UBS3 223 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 SLC6A5Q9Y345 797 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 LYVE1Q9Y5Y7 322 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 U3KQV3 271 aa14.29□□□□□ -0.12
CCDC90B-201ENST00000260054 SPTA1P02549 2419 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 A0A087WUJ7 227 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 TMED7-TICAM2A0A0A6YYA0 188 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 A0A1W2PRQ8 180 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 DEAF1O75398 565 aaPredicted RBP14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 GADD45GO95257 159 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 FCGR1AP12314 374 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 CCNA2P20248 432 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 PTNP21246 168 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 APOBEC1P41238 236 aaKnown RBP14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 IST1P53990 364 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 GFRA1P56159 465 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 DGCR6Q14129 220 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 TRAM2Q15035 370 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 RCN1Q15293 331 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 SLC7A13Q8TCU3 470 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 TMEM255BQ8WV15 326 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 SFXN2Q96NB2 322 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 FUZQ9BT04 418 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 C12orf10Q9HB07 376 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 SELENONQ9NZV5 590 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 CHRNA9Q9UGM1 479 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 TMED7Q9Y3B3 224 aa14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 PRRC2CQ9Y520 2896 aaKnown RBP14.28□□□□□ -0.12
CCDC90B-201ENST00000260054 TRBV4-1A0A0J9YWV2 114 aa14.27□□□□□ -0.12
CCDC90B-201ENST00000260054 TMEM72A0PK05 275 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms