RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 PRODH2Q9UF12 536 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 NFATC1O95644 943 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 CPNE6O95741 557 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 SNRPBP14678 240 aaKnown RBP12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 SLC9A3R2Q15599 337 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 CLLU1Q5K131 121 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 SFXN4Q6P4A7 337 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 KIAA0907Q7Z7F0 614 aaPredicted RBP12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 ZNF778Q96MU6 729 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 HINT2Q9BX68 163 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 TMPRSS5Q9H3S3 457 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 ZDHHC4Q9NPG8 344 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 GPR37L1O60883 481 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 EPHA1P21709 976 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 TMEM225Q6GV28 225 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 HMGN2P46Q86SG4 172 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 KLHDC1Q8N7A1 406 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 KREMEN2Q8NCW0 462 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 BCL7CQ8WUZ0 217 aaPredicted RBP12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 MARCH4Q9P2E8 410 aaPredicted RBP12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 ZNF8P17098 575 aaPredicted RBP12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 ACTR1BP42025 376 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 ACTR1AP61163 376 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 MEF2AQ02078 507 aaPredicted RBP12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 CST9LP1Q5W188 147 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 KLHDC8BQ8IXV7 354 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 SDSLQ96GA7 329 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 KCNIP2Q9NS61 270 aa12.35□□□□□ -0.43
PCDHGA3-201ENST00000253812 PKD1L3Q7Z443 1732 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 NCR1O76036 304 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 PPP1R3DO95685 299 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 ZP3P21754 424 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 CD80P33681 288 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 CCR6P51684 374 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 UBE2IP63279 158 aaKnown RBP12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 CHRNEQ04844 493 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 ADIRFQ15847 76 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 TMEM31Q5JXX7 168 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 HORMAD2Q8N7B1 307 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 OR51Q1Q8NH59 317 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 C2orf15Q8WU43 125 aaKnown RBP12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 C20orf24Q9BUV8 137 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 SLCO5A1Q9H2Y9 848 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 PLEKHJ1Q9NW61 149 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 CPNE7Q9UBL6 633 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 UPK3BL1B0FP48 263 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 UPK3BL2E5RIL1 263 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 M0R3H8 397 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 WASP42768 502 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 RPP30P78346 268 aaKnown RBP12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 ADARB1P78563 741 aaKnown RBP12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 TNK1Q13470 666 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 RPE65Q16518 533 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 SGCAQ16586 387 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 DHRS4L2Q6PKH6 230 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 FBXW12Q6X9E4 464 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 CDH26Q8IXH8 852 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 TCTE3Q8IZS6 198 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 APH1BQ8WW43 257 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 C1orf74Q96LT6 269 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 C1orf123Q9NWV4 160 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 C2orf42Q9NWW7 574 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 RHBDD3Q9Y3P4 386 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 TMEM235A6NFC5 223 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 B4DXG7 233 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 H7BY64 318 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 H7BYZ3 331 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 ATP1B1P05026 303 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 RAC2P15153 192 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 MC3RP41968 323 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 CTXN1P60606 82 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 PRPS1P60891 318 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 TEKQ02763 1124 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 RAB35Q15286 201 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 B3GLCTQ6Y288 498 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 OR13C9Q8NGT0 318 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 DAZAP1Q96EP5 407 aaKnown RBP12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 TRMT2BQ96GJ1 504 aaKnown RBP12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 UHRF2Q96PU4 802 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 GPR88Q9GZN0 384 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 ZNF586Q9NXT0 402 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 KCNIP1Q9NZI2 227 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 NCDNQ9UBB6 729 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 NDRG2Q9UN36 371 aaKnown RBP12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 V9GYS6 101 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 TMEM200CA6NKL6 621 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 CD63P08962 238 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 OR13C7P0DN81 318 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 F3P13726 295 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 PTAFRP25105 342 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 TRHRP34981 398 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 RNF144AP50876 292 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 RAB13P51153 203 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 HNRNPA3P51991 378 aaKnown RBP12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 TAS2R38P59533 333 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 RPS25P62851 125 aaKnown RBP12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 PLP2Q04941 152 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 RIN1Q13671 783 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 C1orf220Q5T0J3 134 aa12.34□□□□□ -0.43
PCDHGA3-201ENST00000253812 RPL22L1Q6P5R6 122 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms