RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 SOCS6O14544 535 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 FOXS1O43638 330 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 IMPDH2P12268 514 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 ATP6V1E1P36543 226 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 RBM34P42696 430 aaKnown RBP11.69□□□□□ -0.54
SNAI1-201ENST00000244050 GABRA4P48169 554 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 RNF144AP50876 292 aaPredicted RBP11.69□□□□□ -0.54
SNAI1-201ENST00000244050 MXD1Q05195 221 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 CD300CQ08708 224 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 CBX3Q13185 183 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 ZNF79Q15937 498 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 GLYR1Q49A26 553 aaPredicted RBP11.69□□□□□ -0.54
SNAI1-201ENST00000244050 TCTE1Q5JU00 501 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 SNAP47Q5SQN1 464 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 DESI1Q6ICB0 168 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 NIPAL3Q6P499 406 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 SMARCD3Q6STE5 483 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 ZNF322Q6U7Q0 402 aaPredicted RBP11.69□□□□□ -0.54
SNAI1-201ENST00000244050 CCBE1Q6UXH8 406 aaPredicted RBP11.69□□□□□ -0.54
SNAI1-201ENST00000244050 ZNF595Q8IYB9 648 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 ACBD7Q8N6N7 88 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 LSMEM1Q8N8F7 131 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 SPRYD4Q8WW59 207 aaPredicted RBP11.69□□□□□ -0.54
SNAI1-201ENST00000244050 CNOT9Q92600 299 aaKnown RBP11.69□□□□□ -0.54
SNAI1-201ENST00000244050 ZNF285Q96NJ3 590 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 ZNF426Q9BUY5 554 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 TRIM2Q9C040 744 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 CHRNA10Q9GZZ6 450 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 ENKD1Q9H0I2 346 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.69□□□□□ -0.54
SNAI1-201ENST00000244050 TOR4AQ9NXH8 423 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 BAIAP2Q9UQB8 552 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 MRPS33Q9Y291 106 aaKnown RBP11.69□□□□□ -0.54
SNAI1-201ENST00000244050 PI4KAP42356 2102 aa11.69□□□□□ -0.54
SNAI1-201ENST00000244050 SNPHO15079 494 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 HCN1O60741 890 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 PAICSP22234 425 aaKnown RBP11.68□□□□□ -0.54
SNAI1-201ENST00000244050 ACAA2P42765 397 aaKnown RBP11.68□□□□□ -0.54
SNAI1-201ENST00000244050 TGM4P49221 684 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 FAM53BQ14153 422 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 ZNF141Q15928 474 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 HLA-BQ31612 363 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 PDZK1Q5T2W1 519 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 PLBD1Q6P4A8 553 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 XKRXQ6PP77 449 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 CARFQ8N187 725 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 SIRT6Q8N6T7 355 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 DNAJA4Q8WW22 397 aaPredicted RBP11.68□□□□□ -0.54
SNAI1-201ENST00000244050 HPS1Q92902 700 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 RIT1Q92963 219 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 CCDC74AQ96AQ1 378 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 KIAA1143Q96AT1 154 aaPredicted RBP11.68□□□□□ -0.54
SNAI1-201ENST00000244050 RBM18Q96H35 190 aaKnown RBP11.68□□□□□ -0.54
SNAI1-201ENST00000244050 VSTM2LQ96N03 204 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 MIXL1Q9H2W2 232 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 ABCB9Q9NP78 766 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 MEPEQ9NQ76 525 aaPredicted RBP11.68□□□□□ -0.54
SNAI1-201ENST00000244050 INPP5EQ9NRR6 644 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 DNAJB12Q9NXW2 375 aaKnown RBP11.68□□□□□ -0.54
SNAI1-201ENST00000244050 FLRT3Q9NZU0 649 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 HCN3Q9P1Z3 774 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 TBC1D24Q9ULP9 559 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 POLHQ9Y253 713 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 PCDHGB2Q9Y5G2 931 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 A0A1B0GWA3 101 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 A0A1W2PQL4 384 aaPredicted RBP11.68□□□□□ -0.54
SNAI1-201ENST00000244050 FAM183AA6NL82 134 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 TTC36A6NLP5 189 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 NPIPB9F8W1W9 429 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 SEC14L5O43304 696 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 NSA2O95478 260 aaKnown RBP11.68□□□□□ -0.54
SNAI1-201ENST00000244050 IGKV1D-16P01601 117 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 FUT1P19526 365 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 PTNP21246 168 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 CSF2RBP32927 897 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 EIF2B2P49770 351 aaKnown RBP11.68□□□□□ -0.54
SNAI1-201ENST00000244050 PSMD4P55036 377 aaKnown RBP11.68□□□□□ -0.54
SNAI1-201ENST00000244050 HSD11B2P80365 405 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 STX4Q12846 297 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 KCNAB1Q14722 419 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 ZNF362Q5T0B9 420 aaPredicted RBP11.68□□□□□ -0.54
SNAI1-201ENST00000244050 DDI2Q5TDH0 399 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 LINC00114Q6XXX2 140 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 ZNF550Q7Z398 422 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 CMIPQ8IY22 773 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 OR8H2Q8N162 312 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 ZFP41Q8N8Y5 198 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 GDPD1Q8N9F7 314 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 OR6C4Q8NGE1 309 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 OR4C6Q8NH72 309 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 SAP25Q8TEE9 199 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 PTP4A1Q93096 173 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 KISS1RQ969F8 398 aaPredicted RBP11.68□□□□□ -0.54
SNAI1-201ENST00000244050 MMABQ96EY8 250 aaPredicted RBP11.68□□□□□ -0.54
SNAI1-201ENST00000244050 ZNF578Q96N58 590 aaPredicted RBP11.68□□□□□ -0.54
SNAI1-201ENST00000244050 IFT27Q9BW83 186 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 RBCK1Q9BYM8 510 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 GAREM1Q9H706 876 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 C14orf119Q9NWQ9 140 aa11.68□□□□□ -0.54
SNAI1-201ENST00000244050 SLC35A3Q9Y2D2 325 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms