RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 MVB12BQ9H7P6 319 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 HHATLQ9HCP6 504 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 RAB9BQ9NP90 201 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 URB1O60287 2271 aaKnown RBP13.01□□□□□ -0.33
TARDBP-201ENST00000240185 VEGFDO43915 354 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 FKTNO75072 461 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 FBLP22087 321 aaKnown RBP13.01□□□□□ -0.33
TARDBP-201ENST00000240185 FOXA1P55317 472 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 SHC2P98077 582 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 SLC10A1Q14973 349 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 PIP5KL1Q5T9C9 394 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 MEPCEQ7L2J0 689 aaKnown RBP13.01□□□□□ -0.33
TARDBP-201ENST00000240185 C15orf54Q8N8G6 183 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 HSD17B11Q8NBQ5 300 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 SLC2A4RGQ9NR83 387 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 C1orf123Q9NWV4 160 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 ANTXRLA6NF34 631 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 SERPINA2P20848 420 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 HCCSP53701 268 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 TMEM31Q5JXX7 168 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 LY6G5CQ5SRR4 150 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 NLGN4XQ8N0W4 816 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 OR9A4Q8NGU2 314 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 OR2T11Q8NH01 316 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 SORT1Q99523 831 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 C7orf72A4D263 438 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 EIF3FO00303 357 aaPredicted RBP13□□□□□ -0.33
TARDBP-201ENST00000240185 TK1P04183 234 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 HAPLN1P10915 354 aaPredicted RBP13□□□□□ -0.33
TARDBP-201ENST00000240185 GPLD1P80108 840 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 C1orf87Q8N0U7 546 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 OR13C9Q8NGT0 318 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 OR8U1Q8NH10 309 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 C12orf57Q99622 126 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 OR52D1Q9H346 318 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 PIGMQ9H3S5 423 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 KCNK13Q9HB14 408 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13□□□□□ -0.33
TARDBP-201ENST00000240185 CUTCQ9NTM9 273 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 IL1RNP18510 177 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 P2RX1P51575 399 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 COL9A2Q14055 689 aaPredicted RBP13□□□□□ -0.33
TARDBP-201ENST00000240185 CLINT1Q14677 625 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 FAM69BQ5VUD6 431 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 SHEQ5VZ18 495 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 OR5L2Q8NGL0 311 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 DPF1Q92782 380 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 DIO2Q92813 273 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 BPIFA2Q96DR5 249 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 MS4A4EQ96PG1 132 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 KATNB1Q9BVA0 655 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 GMEB2Q9UKD1 530 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 A6NIZ1 184 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 C17orf112F2Z3M2 114 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 OR13C7P0DN81 318 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 GABRA5P31644 462 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 GIPRP48546 466 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 RAP1BP61224 184 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 RAP1AP62834 184 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 MFGE8Q08431 387 aaPredicted RBP13□□□□□ -0.33
TARDBP-201ENST00000240185 LRRC26Q2I0M4 334 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 SLX4IPQ5VYV7 408 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 OGFOD3Q6PK18 319 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 SBSNQ6UWP8 590 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 DBX2Q6ZNG2 339 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 OR13F1Q8NGS4 319 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 TXLNGYQ9BZA5 131 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 PDE7BQ9NP56 450 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 BCL9O00512 1426 aa13□□□□□ -0.33
TARDBP-201ENST00000240185 ZNF44P15621 663 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 ELK1P19419 428 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 PITX1P78337 314 aaPredicted RBP12.99□□□□□ -0.33
TARDBP-201ENST00000240185 HNF4GQ14541 408 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 GBX1Q14549 363 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 MELKQ14680 651 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 HBMQ6B0K9 141 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 HIST2H3AQ71DI3 136 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 BPHLQ86WA6 291 aaPredicted RBP12.99□□□□□ -0.33
TARDBP-201ENST00000240185 SEMA6DQ8NFY4 1073 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 SORCS2Q96PQ0 1159 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 HCAR1Q9BXC0 346 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 FOLR1P15328 257 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 DDOSTP39656 456 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 GPR17Q13304 367 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 LRRC56Q8IYG6 542 aaPredicted RBP12.99□□□□□ -0.33
TARDBP-201ENST00000240185 KLHDC7BQ96G42 594 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 CDH20Q9HBT6 801 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 RNASET2O00584 256 aaKnown RBP12.99□□□□□ -0.33
TARDBP-201ENST00000240185 ALPLP05186 524 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 CPOXP36551 454 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 PGGHGQ32M88 737 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 CGB2Q6NT52 195 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 NAA40Q86UY6 237 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 LYSMD2Q8IV50 215 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 OR5M8Q8NGP6 311 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 CENPOQ9BU64 300 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 ARV1Q9H2C2 271 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 PLEK2Q9NYT0 353 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 KPTNQ9Y664 436 aa12.99□□□□□ -0.33
TARDBP-201ENST00000240185 PPP5D1E7EU14 171 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms