RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 WASH2PQ6VEQ5 465 aa19.01■□□□□ 0.63
SNX3-201ENST00000230085 BTN2A1Q7KYR7 527 aa19.01■□□□□ 0.63
SNX3-201ENST00000230085 YIPF5Q969M3 257 aa19.01■□□□□ 0.63
SNX3-201ENST00000230085 FAM46AQ96IP4 442 aaKnown RBP19.01■□□□□ 0.63
SNX3-201ENST00000230085 LCORQ96JN0 433 aaPredicted RBP19.01■□□□□ 0.63
SNX3-201ENST00000230085 TMEM168Q9H0V1 697 aa19.01■□□□□ 0.63
SNX3-201ENST00000230085 KRCC1Q9NPI7 259 aaPredicted RBP19.01■□□□□ 0.63
SNX3-201ENST00000230085 HINT3Q9NQE9 182 aaKnown RBP19.01■□□□□ 0.63
SNX3-201ENST00000230085 TM7SF3Q9NS93 570 aa19.01■□□□□ 0.63
SNX3-201ENST00000230085 UCKL1Q9NWZ5 548 aa19.01■□□□□ 0.63
SNX3-201ENST00000230085 LYARQ9NX58 379 aaKnown RBP19.01■□□□□ 0.63
SNX3-201ENST00000230085 MAT2BQ9NZL9 334 aa19.01■□□□□ 0.63
SNX3-201ENST00000230085 APOBEC3BQ9UH17 382 aaKnown RBP19.01■□□□□ 0.63
SNX3-201ENST00000230085 PTPRZ1P23471 2315 aaPredicted RBP19.01■□□□□ 0.63
SNX3-201ENST00000230085 TRAV1-2A0A0B4J238 106 aa19■□□□□ 0.63
SNX3-201ENST00000230085 BTN3A3O00478 584 aa19■□□□□ 0.63
SNX3-201ENST00000230085 CDX4O14627 284 aaPredicted RBP19■□□□□ 0.63
SNX3-201ENST00000230085 GDF9O60383 454 aa19■□□□□ 0.63
SNX3-201ENST00000230085 GFRA3O60609 400 aa19■□□□□ 0.63
SNX3-201ENST00000230085 RASGRP1O95267 797 aa19■□□□□ 0.63
SNX3-201ENST00000230085 CER1O95813 267 aa19■□□□□ 0.63
SNX3-201ENST00000230085 RRASP10301 218 aa19■□□□□ 0.63
SNX3-201ENST00000230085 ARRB1P49407 418 aaPredicted RBP19■□□□□ 0.63
SNX3-201ENST00000230085 DHODHQ02127 395 aa19■□□□□ 0.63
SNX3-201ENST00000230085 PRRT3Q5FWE3 981 aa19■□□□□ 0.63
SNX3-201ENST00000230085 NDUFAF5Q5TEU4 345 aa19■□□□□ 0.63
SNX3-201ENST00000230085 MRM1Q6IN84 353 aaKnown RBP19■□□□□ 0.63
SNX3-201ENST00000230085 NIPAL3Q6P499 406 aa19■□□□□ 0.63
SNX3-201ENST00000230085 RRM2BQ7LG56 351 aa19■□□□□ 0.63
SNX3-201ENST00000230085 ADGRG3Q86Y34 549 aa19■□□□□ 0.63
SNX3-201ENST00000230085 SIRT6Q8N6T7 355 aa19■□□□□ 0.63
SNX3-201ENST00000230085 OR5K2Q8NHB8 316 aa19■□□□□ 0.63
SNX3-201ENST00000230085 DPH7Q9BTV6 452 aa19■□□□□ 0.63
SNX3-201ENST00000230085 NUDT15Q9NV35 164 aa19■□□□□ 0.63
SNX3-201ENST00000230085 MED9Q9NWA0 146 aa19■□□□□ 0.63
SNX3-201ENST00000230085 H2AFY2Q9P0M6 372 aaPredicted RBP19■□□□□ 0.63
SNX3-201ENST00000230085 ABRACLQ9P1F3 81 aa19■□□□□ 0.63
SNX3-201ENST00000230085 ASF1AQ9Y294 204 aa19■□□□□ 0.63
SNX3-201ENST00000230085 DNMT3AQ9Y6K1 912 aaPredicted RBP19■□□□□ 0.63
SNX3-201ENST00000230085 DMXL1Q9Y485 3027 aa19■□□□□ 0.63
SNX3-201ENST00000230085 TEX13CA0A0J9YWL9 993 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 ZNF749O43361 778 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 SAGP10523 405 aaPredicted RBP18.99■□□□□ 0.63
SNX3-201ENST00000230085 PRKACBP22694 351 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 BLKP51451 505 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 CLCNKAP51800 687 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 HNRNPKP61978 463 aaKnown RBP eCLIP18.99■□□□□ 0.63
SNX3-201ENST00000230085 SNTA1Q13424 505 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 C1orf61Q13536 156 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 ZIC1Q15915 447 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 GSG1Q2KHT4 349 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 SLC30A6Q6NXT4 461 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 CXXC5Q7LFL8 322 aaKnown RBP18.99■□□□□ 0.63
SNX3-201ENST00000230085 UXS1Q8NBZ7 420 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 OR11H4Q8NGC9 324 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 CCL4L1Q8NHW4 92 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 SLC2A12Q8TD20 617 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 PHF21AQ96BD5 680 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 ABHD1Q96SE0 405 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 EDEM2Q9BV94 578 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 KLHL28Q9NXS3 571 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 CNIH4Q9P003 139 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 NTMQ9P121 344 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 C5AR2Q9P296 337 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 TAC3Q9UHF0 121 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 CHST2Q9Y4C5 530 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 PLEKHM1Q9Y4G2 1056 aa18.99■□□□□ 0.63
SNX3-201ENST00000230085 A0A1W2PPV9 198 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 GPR89AB7ZAQ6 455 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 PRAF2O60831 178 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 HMGN2P05204 90 aaKnown RBP18.98■□□□□ 0.63
SNX3-201ENST00000230085 CELA2BP08218 269 aaPredicted RBP18.98■□□□□ 0.63
SNX3-201ENST00000230085 GPR89BP0CG08 455 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 TYRP1P17643 537 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 TSFMP43897 325 aaKnown RBP18.98■□□□□ 0.63
SNX3-201ENST00000230085 PRR5P85299 388 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 HEPHL1Q6MZM0 1159 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 RPL13AP3Q6NVV1 102 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 MEPCEQ7L2J0 689 aaKnown RBP18.98■□□□□ 0.63
SNX3-201ENST00000230085 FAM20CQ8IXL6 584 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 GPR135Q8IZ08 494 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 SAMD12Q8N8I0 201 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 FAM98AQ8NCA5 519 aaKnown RBP18.98■□□□□ 0.63
SNX3-201ENST00000230085 OR8K5Q8NH50 307 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 OR56B4Q8NH76 319 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 LRRC61Q9BV99 259 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 ALG8Q9BVK2 526 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 SLC13A4Q9UKG4 626 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 MDC1Q14676 2089 aaKnown RBP18.98■□□□□ 0.63
SNX3-201ENST00000230085 ZNF292O60281 2723 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 GPR171O14626 319 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 EMC8O43402 210 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 PIAS2O75928 621 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 MT-ND5P03915 603 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 CD1AP06126 327 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 CTSEP14091 401 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 NCBP2P52298 156 aaKnown RBP eCLIP18.98■□□□□ 0.63
SNX3-201ENST00000230085 OR5AR1Q8NGP9 310 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 IL17FQ96PD4 163 aa18.98■□□□□ 0.63
SNX3-201ENST00000230085 CLEC4MQ9H2X3 399 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms