RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 SLC19A3Q9BZV2 496 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 ZNF840PA6NDX5 716 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 GABRB1P18505 474 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 SLC2A5P22732 501 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 GDI1P31150 447 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 AFF3P51826 1226 aaKnown RBP12.92□□□□□ -0.34
HCFC2-201ENST00000229330 ZMAT1Q5H9K5 638 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 NXNL2Q5VZ03 156 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 ZNF425Q6IV72 752 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 TMPRSS9Q7Z410 1059 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 LRRTM3Q86VH5 581 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 OR4N5Q8IXE1 308 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 SLC35F3Q8IY50 421 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 ZNF440Q8IYI8 595 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 APCDD1Q8J025 514 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 OR10Z1Q8NGY1 313 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 TRAPPC4Q9Y296 219 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 TMEM129A0AVI4 362 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 MTHFD2P13995 350 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 MC3RP41968 323 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 CAV2P51636 162 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 HYAL4Q2M3T9 481 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 LCN10Q6JVE6 187 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 PLA2G15Q8NCC3 412 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 NUDT8Q8WV74 236 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 ASB11Q8WXH4 323 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 LINC01599Q8WXQ3 324 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 MS4A4AQ96JQ5 239 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 TNFRSF12AQ9NP84 129 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 ZDHHC4Q9NPG8 344 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 TUBG2Q9NRH3 451 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 PRODH2Q9UF12 536 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 CPEP16870 476 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 MAOBP27338 520 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 HCCSP53701 268 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 SMUG1Q53HV7 270 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 SLC38A5Q8WUX1 472 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 SMIM14Q96QK8 99 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 SLC38A3Q99624 504 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 EVA1BQ9NVM1 165 aa12.92□□□□□ -0.34
HCFC2-201ENST00000229330 HCRTR2O43614 444 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 GJB3O75712 270 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 CSF2RAP15509 400 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 KIR2DL3P43628 341 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 CLDN12P56749 244 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 OR10K2Q6IF99 312 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 DNAAF1Q8NEP3 725 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 OR6N1Q8NGY5 312 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 KHSRPQ92945 711 aaKnown RBP eCLIP12.91□□□□□ -0.34
HCFC2-201ENST00000229330 ZNF768Q9H5H4 540 aaKnown RBP12.91□□□□□ -0.34
HCFC2-201ENST00000229330 ZNF385DQ9H6B1 395 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 RLIMQ9NVW2 624 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 COL18A1P39060 1754 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 NPIPB15A6NHN6 443 aaPredicted RBP12.91□□□□□ -0.34
HCFC2-201ENST00000229330 TNFRSF10BO14763 440 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 RAD1O60671 282 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 HTR1FP30939 366 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 GPLD1P80108 840 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 CCINQ13939 588 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 VASNQ6EMK4 673 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 OR5T1Q8NG75 326 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 OR14A2Q96R54 314 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 MUTYHQ9UIF7 546 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 RGS13O14921 159 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 KIAA0355O15063 1070 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 GPR50Q13585 617 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 ARL6IP1Q15041 203 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 LY6G5CQ5SRR4 150 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 BEND4Q6ZU67 534 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 CLRN3Q8NCR9 226 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 OR4C15Q8NGM1 316 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 RHNO1Q9BSD3 238 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 TGIF2Q9GZN2 237 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 SLC6A20Q9NP91 592 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 SLC23A1Q9UHI7 598 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 NWD2Q9ULI1 1742 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 MYO10Q9HD67 2058 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 SLC22A23A1A5C7 686 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 S100A8P05109 93 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 ETV5P41161 510 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 CLRN1P58418 232 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 CLLU1Q5K131 121 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 HEPHL1Q6MZM0 1159 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 ZNF619Q8N2I2 560 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 EID2Q8N6I1 236 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 C14orf79Q96F83 325 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 OPALINQ96PE5 141 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 CSF3RQ99062 836 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 DDX60Q8IY21 1712 aaKnown RBP12.91□□□□□ -0.34
HCFC2-201ENST00000229330 SBK3P0C264 359 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 COX20Q5RI15 118 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 ZNF322Q6U7Q0 402 aaPredicted RBP12.91□□□□□ -0.34
HCFC2-201ENST00000229330 VRK2Q86Y07 508 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 OR9A2Q8NGT5 310 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 OLIG1Q8TAK6 271 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 LRIG1Q96JA1 1093 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 SLC25A32Q9H2D1 315 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 ZNF629Q9UEG4 869 aaPredicted RBP12.91□□□□□ -0.34
HCFC2-201ENST00000229330 NPFFR2Q9Y5X5 522 aa12.91□□□□□ -0.34
HCFC2-201ENST00000229330 TRAV27A0A087WT01 109 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms