RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 NIPAL3Q6P499 406 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 PODNL1Q6PEZ8 512 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 LMNTD1Q8N9Z9 388 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 ASB17Q8WXJ9 295 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 DDX31Q9H8H2 851 aaKnown RBP17.68■□□□□ 0.42
SMPD3-201ENST00000219334 A8MV72 311 aaPredicted RBP17.68■□□□□ 0.42
SMPD3-201ENST00000219334 IL2RGP31785 369 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 KEAP1Q14145 624 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 BCL2A1Q16548 175 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 SLC5A12Q1EHB4 618 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 MTFR2Q6P444 385 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 RNF175Q8N4F7 328 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 ANKRD34BA5PLL1 514 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 TRIM64CA6NLI5 447 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 TNFRSF10CO14798 259 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 RAB3DO95716 219 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 SLC46A1Q96NT5 459 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 PCDHGA8Q9Y5G5 932 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.68■□□□□ 0.42
SMPD3-201ENST00000219334 PPP6CO00743 305 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 ZNF780AO75290 641 aaPredicted RBP17.68■□□□□ 0.42
SMPD3-201ENST00000219334 GYPBP06028 91 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 OR1D5P58170 312 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 HBA1P69905 142 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 CYCSP99999 105 aaKnown RBP17.68■□□□□ 0.42
SMPD3-201ENST00000219334 GGTA1PQ4G0N0 100 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 LRRC18Q8N456 261 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 SNAPC3Q92966 411 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 RGCCQ9H4X1 137 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 PRMT8Q9NR22 394 aaPredicted RBP17.68■□□□□ 0.42
SMPD3-201ENST00000219334 OR14J1Q9UGF5 321 aa17.68■□□□□ 0.42
SMPD3-201ENST00000219334 CD300LBA8K4G0 201 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 HOXC11O43248 304 aaPredicted RBP17.67■□□□□ 0.42
SMPD3-201ENST00000219334 DENRO43583 198 aaKnown RBP17.67■□□□□ 0.42
SMPD3-201ENST00000219334 TIMM8AO60220 97 aaPredicted RBP17.67■□□□□ 0.42
SMPD3-201ENST00000219334 ITGB2P05107 769 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 HTR2AP28223 471 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 CYB561P49447 251 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 CAMK2DQ13557 499 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 HAGHLQ6PII5 290 aaPredicted RBP17.67■□□□□ 0.42
SMPD3-201ENST00000219334 GDPGP1Q6ZNW5 385 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 RFLNAQ6ZTI6 216 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 SLC16A9Q7RTY1 509 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 TMEM100Q9NV29 134 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 SDHAF2Q9NX18 166 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 COQ3Q9NZJ6 369 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 LHX6Q9UPM6 363 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 CCDC88AQ3V6T2 1871 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 ALDOBP05062 364 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 TACR3P29371 465 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 MGAT3Q09327 533 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 PLAG1Q6DJT9 500 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 ZNF534Q76KX8 674 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 FNDC8Q8TC99 324 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 OR5B12Q96R08 314 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 FOLH1BQ9HBA9 442 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 TEX10Q9NXF1 929 aaPredicted RBP17.67■□□□□ 0.42
SMPD3-201ENST00000219334 TMEM181Q9P2C4 612 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 PRDM4Q9UKN5 801 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 SERINC4A6NH21 518 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 DVL2O14641 736 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 SHOXO15266 292 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 DHRS4L1P0CG22 281 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 CARD18P57730 90 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 KIAA1024LP59773 190 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 EXT1Q16394 746 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 PGGHGQ32M88 737 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 SLC36A2Q495M3 483 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 SLC41A2Q96JW4 573 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 CALHM2Q9HA72 323 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 WASH6PQ9NQA3 447 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 F13BP05160 661 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 TAS2R31P59538 309 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 RIPPLY1Q0D2K3 151 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 CHDHQ8NE62 594 aaPredicted RBP17.67■□□□□ 0.42
SMPD3-201ENST00000219334 FOXN4Q96NZ1 517 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 PGAP2Q9UHJ9 254 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 MYH1P12882 1939 aa17.67■□□□□ 0.42
SMPD3-201ENST00000219334 CHD4Q14839 1912 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 F10P00742 488 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 ETV5P41161 510 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 CAMLGP49069 296 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 REEP5Q00765 189 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 AKR1C8PQ5T2L2 129 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 RTL6Q6ICC9 239 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 KIAA1211LQ6NV74 962 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 FAM111BQ6SJ93 734 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 ITFG2Q969R8 447 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 S100PBPQ96BU1 408 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 SLC19A3Q9BZV2 496 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 PRDM9Q9NQV7 894 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 EDARQ9UNE0 448 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 EIF1P41567 113 aaKnown RBP17.66■□□□□ 0.42
SMPD3-201ENST00000219334 FAM57BQ71RH2 274 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 MEPCEQ7L2J0 689 aaKnown RBP17.66■□□□□ 0.42
SMPD3-201ENST00000219334 TPRA1Q86W33 373 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 PGBD5Q8N414 524 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 STEAP2Q8NFT2 490 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 PSMF1Q92530 271 aa17.66■□□□□ 0.42
SMPD3-201ENST00000219334 RSPRY1Q96DX4 576 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms