RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 RykQ01887 594 aa12.02□□□□□ -0.49
Nup88-203ENSMUST00000108531 Dcst1Q059Y8 732 aa12.02□□□□□ -0.49
Nup88-203ENSMUST00000108531 Rnf180Q3U827 592 aa12.02□□□□□ -0.49
Nup88-203ENSMUST00000108531 Q3USZ8 430 aa12.02□□□□□ -0.49
Nup88-203ENSMUST00000108531 Slc47a2Q3V050 573 aa12.02□□□□□ -0.49
Nup88-203ENSMUST00000108531 Fam46cQ5SSF7 391 aa12.02□□□□□ -0.49
Nup88-203ENSMUST00000108531 Scgb2b2Q6UGQ3 114 aa12.02□□□□□ -0.49
Nup88-203ENSMUST00000108531 Mrps7Q80X85 242 aaKnown RBP12.02□□□□□ -0.49
Nup88-203ENSMUST00000108531 Nudt15Q8BG93 170 aa12.02□□□□□ -0.49
Nup88-203ENSMUST00000108531 Rhbdd3Q8BP97 385 aa12.02□□□□□ -0.49
Nup88-203ENSMUST00000108531 Rbm34Q8C5L7 375 aaKnown RBP12.02□□□□□ -0.49
Nup88-203ENSMUST00000108531 Clrn1Q8K445 232 aa12.02□□□□□ -0.49
Nup88-203ENSMUST00000108531 Zc3h10Q8R205 435 aaKnown RBP12.02□□□□□ -0.49
Nup88-203ENSMUST00000108531 Nxnl1Q8VC33 217 aa12.02□□□□□ -0.49
Nup88-203ENSMUST00000108531 Tnk1Q99ML2 666 aa12.02□□□□□ -0.49
Nup88-203ENSMUST00000108531 Aldh9a1Q9JLJ2 494 aa12.02□□□□□ -0.49
Nup88-203ENSMUST00000108531 Igkv6-29A0A0G2JEI6 115 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Spata6lB2RV46 347 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 SrsxB2RZI1 361 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Zfp141G3UY09 685 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 MfngO09008 321 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Rasd1O35626 280 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 BckdkO55028 412 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 4930480E11RikQ0VG34 394 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 CishQ62225 257 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Eid2Q6X7S9 236 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Methig1Q76I26 264 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Olfr645Q7TRQ1 315 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Pcdh19Q80TF3 1145 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Slc38a9Q8BGD6 560 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Slc6a17Q8BJI1 727 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Nyap2Q8BM65 682 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Slc25a21Q8BZ09 298 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 GatcQ8CBY0 155 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Agbl3Q8CDP0 1006 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Rnf222Q8CEF8 211 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Slc1a7Q8JZR4 559 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Eipr1Q8K0G5 386 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Tmem17Q8K0U3 198 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Lyrm4Q8K215 91 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Olfr63Q8VBW9 316 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 DutQ8VCG1 200 aaKnown RBP12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Pafah2Q8VDG7 390 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Olfr99Q8VFE4 305 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Jam3Q9D8B7 310 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Fank1Q9DAM9 344 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Elovl4Q9EQC4 312 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Auts2A0A087WPF7 1261 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Dmrtb1A2A9I7 359 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Adap1E9PY16 374 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Gpr31F8VQN3 319 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Pmm1O35621 262 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Nipsnap2O55126 281 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Zfp59P16373 634 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Olfr6P34986 316 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Rfx3P48381 749 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Hectd3Q3U487 861 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Klk8Q61955 260 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 BocQ6AZB0 1110 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Atp11bQ6DFW5 1175 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Ffar4Q7TMA4 361 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Eri1Q7TMF2 345 aaKnown RBP12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Hs6st2Q80UW0 612 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Rgp1Q8BHT7 391 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Endod1Q8C522 501 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 H1fntQ8CJI4 398 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Tma7Q8K003 64 aaKnown RBP12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Olfr1261Q8VFB0 306 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Pcdhb16Q91Y03 802 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Cts3Q91ZD5 332 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 WacQ924H7 646 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Mrm2Q9CPY0 246 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Pdzk1ip1Q9CQH0 114 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 2410137M14RikQ9CWF0 162 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Cmpk1Q9DBP5 196 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Slc46a3Q9DC26 460 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Adat1Q9JHI2 499 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Myo7aP97479 2215 aa12.01□□□□□ -0.49
Nup88-203ENSMUST00000108531 Gm4779A0A1B0GR91 561 aa12□□□□□ -0.49
Nup88-203ENSMUST00000108531 Btbd2E9PUS2 523 aa12□□□□□ -0.49
Nup88-203ENSMUST00000108531 H2-M11F6U8V3 335 aa12□□□□□ -0.49
Nup88-203ENSMUST00000108531 Vmn2r69G3XA45 850 aa12□□□□□ -0.49
Nup88-203ENSMUST00000108531 Vmn1r14H3BJ46 303 aa12□□□□□ -0.49
Nup88-203ENSMUST00000108531 Slc10a1O08705 362 aa12□□□□□ -0.49
Nup88-203ENSMUST00000108531 Bhlhe40O35185 411 aa12□□□□□ -0.49
Nup88-203ENSMUST00000108531 FkbplO35450 347 aa12□□□□□ -0.49
Nup88-203ENSMUST00000108531 Cacng2O88602 323 aa12□□□□□ -0.49
Nup88-203ENSMUST00000108531 Eef1a1P10126 462 aaKnown RBP12□□□□□ -0.49
Nup88-203ENSMUST00000108531 Resp18P47939 175 aa12□□□□□ -0.49
Nup88-203ENSMUST00000108531 Arpc4P59999 168 aaKnown RBP12□□□□□ -0.49
Nup88-203ENSMUST00000108531 MakQ04859 622 aa12□□□□□ -0.49
Nup88-203ENSMUST00000108531 Qsox2Q3TMX7 692 aa12□□□□□ -0.49
Nup88-203ENSMUST00000108531 Cd47Q61735 303 aa12□□□□□ -0.49
Nup88-203ENSMUST00000108531 Q80Y39 304 aa12□□□□□ -0.49
Nup88-203ENSMUST00000108531 Cox15Q8BJ03 413 aa12□□□□□ -0.49
Nup88-203ENSMUST00000108531 Ces2eQ8BK48 559 aa12□□□□□ -0.49
Nup88-203ENSMUST00000108531 Slc35c1Q8BLX4 363 aa12□□□□□ -0.49
Nup88-203ENSMUST00000108531 Slc16a14Q8K1C7 512 aa12□□□□□ -0.49
Nup88-203ENSMUST00000108531 MepceQ8K3A9 666 aaKnown RBP12□□□□□ -0.49
Nup88-203ENSMUST00000108531 Tmem242Q8VCR3 140 aa12□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms