RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 MyotQ9JIF9 496 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ltn1Q6A009 1767 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr588-ps1A0A1B0GSZ2 313 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Pate3B3GLJ3 98 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr740E9PV79 311 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn2r124K7N789 855 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Aup1P70295 410 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Msto1Q2YDW2 556 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 CrxosQ3UL53 246 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr787Q7TRI1 312 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 EogtQ8BYW9 527 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr1391Q8VFA4 311 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr985Q8VGB4 311 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Oosp1Q925U0 202 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gje1Q9CX92 205 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ca7Q9ERQ8 264 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cyp11a1Q9QZ82 526 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Stub1Q9WUD1 304 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Pgap3A2A559 320 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn1r77E9PY60 306 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gm10608E9PZ13 166 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 NnmtO55239 264 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 AdprhP54923 362 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rps15P62843 145 aaKnown RBP11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 RelbQ04863 558 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gcnt7Q3V3K7 433 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 PtprjQ64455 1238 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rslcan18Q7M6X5 460 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vrk1Q80X41 440 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 H2-Q4Q8HWB2 354 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Nectin4Q8R007 508 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 1700034I23RikQ9D9Q3 184 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Lman2Q9DBH5 358 aaKnown RBP11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gde1Q9JL56 331 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Zfp69A2A761 587 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Hoxc8P09025 242 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Otx2P80206 289 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Grxcr1Q50H32 290 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 PigaQ64323 485 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cypt4Q6P925 153 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr538Q7TRT5 310 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ubl7Q91W67 380 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Bbc3Q99ML1 193 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 LipfQ9CPP7 395 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 9930021J03RikH3BKP8 2027 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ecm29Q6PDI5 1840 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn2r60L7N2A1 853 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 GzmeP08884 248 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 UevldQ3U1V6 471 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Prrc1Q3UPH1 443 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr1322Q7TQW3 310 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Acp6Q8BP40 418 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr441Q8VFS5 310 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rsc1a1Q9ER99 582 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rd3lB2RV38 197 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 EhfO70273 300 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 LhcgrP30730 700 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 SstP60041 116 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Grhl3Q5FWH3 603 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Nox3Q672J9 568 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Slc45a1Q8BIV7 751 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 ClmpQ8R373 373 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 CmipQ9D486 773 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 1700028J19RikA0A0U1RP08 172 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Catsperg1E9Q355 1151 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Eif4eP63073 217 aaKnown RBP11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Il9rQ01114 468 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 MakQ04859 622 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 BC100530Q497J0 97 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Amer2Q8CCJ4 672 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cox4i2Q91W29 172 aa11.28□□□□□ -0.6
Trim56-201ENSMUST00000054384 Esp18A8R0V1 91 aa11.27□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr417F8VQB1 309 aa11.27□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ring1O35730 406 aa11.27□□□□□ -0.6
Trim56-201ENSMUST00000054384 Olfr1307Q7TQX1 312 aa11.27□□□□□ -0.6
Trim56-201ENSMUST00000054384 Klhdc8aQ91XA8 350 aa11.27□□□□□ -0.6
Trim56-201ENSMUST00000054384 OxsmQ9D404 459 aa11.27□□□□□ -0.6
Trim56-201ENSMUST00000054384 Nipa2Q9JJC8 359 aa11.27□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cdkn2bP55271 130 aa11.27□□□□□ -0.6
Trim56-201ENSMUST00000054384 Cd80Q00609 306 aa11.27□□□□□ -0.6
Trim56-201ENSMUST00000054384 Map3k8Q07174 467 aa11.27□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ccbe1Q3MI99 408 aa11.27□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gpr160Q3U3F9 336 aa11.27□□□□□ -0.6
Trim56-201ENSMUST00000054384 Znf185Q62394 352 aa11.27□□□□□ -0.6
Trim56-201ENSMUST00000054384 Abhd18Q8C1A9 464 aa11.27□□□□□ -0.6
Trim56-201ENSMUST00000054384 TardbpQ921F2 414 aaKnown RBP11.27□□□□□ -0.6
Trim56-201ENSMUST00000054384 Fmo6J3QMN6 532 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gm19965J3QNY8 723 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Olfr237-ps1K9J725 310 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Gabra6P16305 453 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Vmn1r196Q5SVD5 301 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Cd47Q61735 303 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Poldip3Q8BG81 420 aaKnown RBP11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Csnk1g3Q8C4X2 424 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Sirt5Q8K2C6 310 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Slc14a1Q8VHL0 384 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Med6Q921D4 246 aaKnown RBP11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Dph2Q9CR25 489 aa11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Nup205A0A0J9YUD5 2061 aaKnown RBP11.27□□□□□ -0.61
Trim56-201ENSMUST00000054384 Adamts10P58459 1104 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms