RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Gm20824A0A087WS97 222 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm21996A0A087WSS9 222 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm28870A0A0A6YW38 222 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm29866A0A0A6YX04 222 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 A0A286YD17 136 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Ggta1l1A2AUQ7 319 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 2610021A01RikE9Q0Q3 834 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm5407E9Q7Q1 248 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Spaca6E9Q8Q8 339 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm28048F7BCN0 99 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Cyp4a31F8WGU9 509 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 PahP16331 453 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Foxk1P42128 719 aaKnown RBP6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Rab8bP61028 207 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 JupQ02257 745 aaKnown RBP6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Slc37a3Q3TIT8 494 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 1700012B07RikQ3V0S8 276 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 SypQ62277 314 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Tas2r40Q7TQB8 319 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm21627Q810R0 219 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Arfrp1Q8BXL7 201 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 TrhdeQ8K093 1025 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Rab38Q8QZZ8 211 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Vmn1r24Q8R2D6 296 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Q8R2K8 148 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Q8R3C1 574 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Olfr1390Q8VGW9 311 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Pcdhga11Q91XY8 933 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Cd209eQ91ZW7 208 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Chrm5Q920H4 532 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Prps2Q9CS42 318 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Rita1Q9D1H0 253 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 MmabQ9D273 237 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Wdr61Q9ERF3 305 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Dclre1aQ9JIC3 1026 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 ClnkQ9QZE2 435 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Abca12E9Q876 2595 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Cspg4Q8VHY0 2327 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Fer1l4A3KGK3 1992 aa6.4□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm595A2AF73 655 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm20489A2AGH5 449 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm42791D3YYB5 209 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Vmn2r120E9PX34 856 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Vmn1r175K7N6T9 304 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gtpbp1O08582 668 aaKnown RBP6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 EllO08856 602 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Cxcl10P17515 98 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 BdnfP21237 249 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Rad52P43352 420 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Defa-rs7P50715 91 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 MtpnP62774 118 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Igfbp5Q07079 271 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Ccdc106Q3ULM0 279 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Zfp36l3Q5ISE2 725 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Usf1Q61069 310 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Abhd13Q80UX8 337 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Znf592Q8BHZ4 1262 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Cdkl3Q8BLF2 595 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Adamts4Q8BNJ2 833 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Prelid1Q8R107 217 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Myoz3Q8R4E4 245 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Ttc36Q8VBW8 186 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Lipt1Q8VCM4 373 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Mrgpra5Q91ZC7 304 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Znf639Q99KZ6 485 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 PglsQ9CQ60 257 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gje1Q9CX92 205 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 TrmuQ9DAT5 417 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Eif3fQ9DCH4 361 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Olfr971Q9EQ96 307 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 4930433I11RikA0A0U1RPT6 723 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 4930595D18RikD3Z642 64 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Dscr3O35075 297 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Slc6a6O35316 621 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Anxa2P07356 339 aaKnown RBP6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Hoxc11P31313 304 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 AboP38649 332 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Etv2P41163 335 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Psme2P97372 239 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Smim24Q0VG18 120 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Cr1lQ64735 483 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Tmem151aQ6GQT5 468 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Ube2j2Q6P073 259 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Ckmt2Q6P8J7 419 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Pif1Q80SX8 650 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Fndc11Q80WB0 326 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Prmt5Q8CIG8 637 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Serinc2Q8K0E7 450 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Olfr689Q8VG18 320 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Dtwd2Q9D0U1 298 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 TrirQ9D735 173 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Prl3c1Q9QUN5 212 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Nxt1Q9QZV9 140 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm5475D3YV11 175 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Sult2a3D3Z1W5 285 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Olfr605E9Q838 314 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Gm21972J3QN38 98 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Vmn2r61L7N2B8 865 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 Csf2P01587 141 aa6.39□□□□□ -1.39
Bdnf-201ENSMUST00000053317 GhrP16882 650 aa6.39□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms