RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Hdac8Q8VH37 377 aa10.18□□□□□ -0.78
Msh3-201ENSMUST00000022220 Masp2Q91WP0 685 aa10.18□□□□□ -0.78
Msh3-201ENSMUST00000022220 SmoxQ99K82 555 aa10.18□□□□□ -0.78
Msh3-201ENSMUST00000022220 NaxdQ9CZ42 343 aa10.18□□□□□ -0.78
Msh3-201ENSMUST00000022220 Gabra4Q9D6F4 552 aa10.18□□□□□ -0.78
Msh3-201ENSMUST00000022220 Cyp4a30bA0A087WS15 508 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Zfp993A2A8V4 313 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 A6H6Q4 206 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Skint9A7TZG3 319 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Zfp738B8JJX8 793 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Tmem200cJ3QK46 637 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Prdx4O08807 274 aaKnown RBP10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Atxn1P54254 791 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Slc16a3P57787 470 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Serpinf1P97298 417 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Nxpe2Q3U095 558 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Taar2Q5QD17 339 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Ankrd46Q8BTZ5 228 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 SuoxQ8R086 546 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Olfr1263Q8VG63 306 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Olfr649Q8VGW1 312 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 PxnQ8VI36 591 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 ScgnQ91WD9 276 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Mcoln1Q99J21 580 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Timm22Q9CQ85 194 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Rpl14Q9CR57 217 aaKnown RBP10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Ceacam20Q9D2Z1 577 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Cers5Q9D6K9 414 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Tas2r103Q9JKA3 312 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Tp53bp1P70399 1969 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Vmn1r90A0A087WR36 309 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Esp22A8R0V4 111 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Gm572B1ARY8 399 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Saxo1B1AXP3 476 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Olfr631F8VPJ9 319 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Cyp4a31F8WGU9 509 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Vmn2r51L7N215 852 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 PvalbP32848 110 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Mc3rP33033 323 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Barhl1P63157 327 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Defb43Q30KM9 69 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Taar7dQ5QD10 358 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Cr1lQ64735 483 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Supv3l1Q80YD1 779 aaKnown RBP10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Atg4bQ8BGE6 393 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Pomt2Q8BGQ4 820 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 NdnfQ8C119 568 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Tmem150cQ8C8S3 249 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Angptl8Q8R1L8 198 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Rdh10Q8VCH7 341 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Mrgpra1Q91WW5 304 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Dusp7Q91Z46 422 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Sh3bp4Q921I6 962 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Tmem43Q9DBS1 400 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Tmem176aQ9DCS1 244 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Gdf2Q9WV56 428 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Pi4kaE9Q3L2 2105 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Cep350E9Q309 3095 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Pgbd5D3YZI9 523 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Olfr746E9Q840 314 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 4930451I11RikE9Q9R3 111 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Omt2aF6ZJR3 104 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Zfp616J3QN14 987 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Hoxb3P09026 433 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 OtcP11725 354 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Rps25P62852 125 aaKnown RBP10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 OgnQ62000 298 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Arhgef4Q7TNR9 484 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Hcar1Q8C131 343 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Ikzf4Q8C208 586 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Rfc3Q8R323 356 aaKnown RBP10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Lrrc3bQ8VCH9 259 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Clec2fQ8VI21 196 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Dus3lQ91XI1 637 aaKnown RBP10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Med28Q920D3 178 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 1700029P11RikQ9CQ68 150 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Cpn2Q9DBB9 547 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 RetnlaQ9EP95 111 aa10.17□□□□□ -0.78
Msh3-201ENSMUST00000022220 Spaca5A2AE20 160 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Rnf39A2RT81 352 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Gm2056J3QQ02 144 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Vmn2r9K7N6Z8 848 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Psma3O70435 255 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 PrkacaP05132 351 aaKnown RBP10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Zfp1P08042 402 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Hsf2P38533 535 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 AmbpQ07456 349 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Tmem248Q3TBN1 314 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 MeikinQ5F2C3 434 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Tpgs2Q66JT5 296 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Eid2Q6X7S9 236 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Ubfd1Q78JW9 368 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Spag1Q80ZX8 901 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Zfpm2Q8CCH7 1151 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Nfatc4Q8K120 901 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Slc38a1Q8K2P7 485 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Man2c1Q91W89 1039 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Socs6Q9JLY0 533 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Col6a6Q8C6K9 2265 aa10.16□□□□□ -0.78
Msh3-201ENSMUST00000022220 Pcdh15Q99PJ1 1943 aa10.16□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms