RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 ENTPD1P49961 510 aa13.33□□□□□ -0.28
CHD1L-211ENST00000639534 RNF144AP50876 292 aaPredicted RBP13.33□□□□□ -0.28
CHD1L-211ENST00000639534 GAS1P54826 345 aa13.33□□□□□ -0.28
CHD1L-211ENST00000639534 WNT4P56705 351 aa13.33□□□□□ -0.28
CHD1L-211ENST00000639534 NCS1P62166 190 aa13.33□□□□□ -0.28
CHD1L-211ENST00000639534 LSM3P62310 102 aaKnown RBP13.33□□□□□ -0.28
CHD1L-211ENST00000639534 DCDP81605 110 aaKnown RBP13.33□□□□□ -0.28
CHD1L-211ENST00000639534 CRYZQ08257 329 aaKnown RBP13.33□□□□□ -0.28
CHD1L-211ENST00000639534 ANKDD1AQ495B1 522 aa13.33□□□□□ -0.28
CHD1L-211ENST00000639534 PRAMEF17Q5VTA0 474 aa13.33□□□□□ -0.28
CHD1L-211ENST00000639534 NUP54Q7Z3B4 507 aa13.33□□□□□ -0.28
CHD1L-211ENST00000639534 BCDIN3DQ7Z5W3 292 aaKnown RBP13.33□□□□□ -0.28
CHD1L-211ENST00000639534 ZNF321PQ8N8H1 164 aa13.33□□□□□ -0.28
CHD1L-211ENST00000639534 PHOSPHO1Q8TCT1 267 aa13.33□□□□□ -0.28
CHD1L-211ENST00000639534 METTL21AQ8WXB1 218 aa13.33□□□□□ -0.28
CHD1L-211ENST00000639534 EFHD2Q96C19 240 aaPredicted RBP13.33□□□□□ -0.28
CHD1L-211ENST00000639534 DACH2Q96NX9 599 aa13.33□□□□□ -0.28
CHD1L-211ENST00000639534 GAL3ST4Q96RP7 486 aa13.33□□□□□ -0.28
CHD1L-211ENST00000639534 GFM1Q96RP9 751 aaKnown RBP13.33□□□□□ -0.28
CHD1L-211ENST00000639534 MMP27Q9H306 513 aa13.33□□□□□ -0.28
CHD1L-211ENST00000639534 ATP13A2Q9NQ11 1180 aa13.33□□□□□ -0.28
CHD1L-211ENST00000639534 TAS2R16Q9NYV7 291 aa13.33□□□□□ -0.28
CHD1L-211ENST00000639534 KLHL21Q9UJP4 597 aa13.33□□□□□ -0.28
CHD1L-211ENST00000639534 GPR52Q9Y2T5 361 aa13.33□□□□□ -0.28
CHD1L-211ENST00000639534 SLC22A31A6NKX4 558 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 ELOA3DA6NLF2 546 aaPredicted RBP13.32□□□□□ -0.28
CHD1L-211ENST00000639534 CLDN25C9JDP6 229 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 PRR23D1E9PI22 279 aaPredicted RBP13.32□□□□□ -0.28
CHD1L-211ENST00000639534 TSPAN2O60636 221 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 CH25HO95992 272 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 PRR23D2P0DMB1 279 aaPredicted RBP13.32□□□□□ -0.28
CHD1L-211ENST00000639534 PEPDP12955 493 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 ZNF3P17036 446 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 PSMA1P25786 263 aaKnown RBP13.32□□□□□ -0.28
CHD1L-211ENST00000639534 SOX6P35712 828 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 CAPZA2P47755 286 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 NRG3P56975 720 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 RAB15P59190 212 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 FOXK2Q01167 660 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 PLCXD2Q0VAA5 305 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 SKP2Q13309 424 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 EFR3AQ14156 821 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 IL11RAQ14626 422 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 ZNF528Q3MIS6 628 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 ELOA3BQ3SY89 546 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 MEPCEQ7L2J0 689 aaKnown RBP13.32□□□□□ -0.28
CHD1L-211ENST00000639534 OVCH1Q7RTY7 1134 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 TMPRSS9Q7Z410 1059 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 ATCAYQ86WG3 371 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 PPP1R3BQ86XI6 285 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 ZNF441Q8N8Z8 693 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 DTWD2Q8NBA8 298 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 ELOA3Q8NG57 546 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 OR13C2Q8NGS9 318 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 RPL3LQ92901 407 aaKnown RBP13.32□□□□□ -0.28
CHD1L-211ENST00000639534 C3orf49Q96BT1 292 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 SYNDIG1Q9H7V2 258 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 FBXO8Q9NRD0 319 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 INPP5EQ9NRR6 644 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 NDUFB11Q9NX14 153 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 C19orf25Q9UFG5 118 aaPredicted RBP13.32□□□□□ -0.28
CHD1L-211ENST00000639534 STUB1Q9UNE7 303 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 B3GNT3Q9Y2A9 372 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 ZNF337Q9Y3M9 751 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 PCDHGB6Q9Y5F9 930 aa13.32□□□□□ -0.28
CHD1L-211ENST00000639534 GOLGA4Q13439 2230 aaKnown RBP13.31□□□□□ -0.28
CHD1L-211ENST00000639534 UNC80Q8N2C7 3258 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 SAGE2PA6NJ88 616 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 IDH3BO43837 385 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 ADAM11O75078 769 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 ALOX12BO75342 701 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 OR7A10O76100 309 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 IGHA1P01876 353 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 ADRA2AP08913 450 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 FGF5P12034 268 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 CPEP16870 476 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 ATP6V1E1P36543 226 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 ETV5P41161 510 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 ETV1P50549 477 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 BMXP51813 675 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 NR0B1P51843 470 aaKnown RBP13.31□□□□□ -0.28
CHD1L-211ENST00000639534 LIMK1P53667 647 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 FXYD6P3P58550 94 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 ACSM1Q08AH1 577 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 ISXQ2M1V0 245 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 TRIM61Q5EBN2 209 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 NIPAL3Q6P499 406 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 CPOQ8IVL8 374 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 MISPQ8IVT2 679 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 C9orf40Q8IXQ3 194 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 KLHL36Q8N4N3 616 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 TMCO5AQ8N6Q1 288 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 OR52N1Q8NH53 320 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 LIPHQ8WWY8 451 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 SH3YL1Q96HL8 342 aaPredicted RBP13.31□□□□□ -0.28
CHD1L-211ENST00000639534 ADOQ96SZ5 270 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 CHCHD6Q9BRQ6 235 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 SEMA4CQ9C0C4 833 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 SLC26A1Q9H2B4 701 aa13.31□□□□□ -0.28
CHD1L-211ENST00000639534 HINT3Q9NQE9 182 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms