RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 PLA2G3Q9NZ20 509 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 GXYLT2A0PJZ3 443 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 M0R082 166 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 FFAR1O14842 300 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 SMIM10L1P0DMW3 83 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 INPP1P49441 399 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 KLHL22Q53GT1 634 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 RAET1LQ5VY80 246 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 LCN10Q6JVE6 187 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 MFSD4AQ8N468 514 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 RFKQ969G6 155 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 SMIM10Q96HG1 83 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 QRSL1Q9H0R6 528 aaKnown RBP11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 PALMDQ9NP74 551 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 PLCXD1Q9NUJ7 323 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 ACER3Q9NUN7 267 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 LUZP4Q9P127 313 aa11.48□□□□□ -0.57
SYNGAP1-207ENST00000628646 C2orf72A6NCS6 295 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 ACOT7O00154 380 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 MASP2O00187 686 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 KPNA4O00629 521 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 ATP1B1P05026 303 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 HMGN1P05114 100 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 CT62P0C5K7 136 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 GP1BBP13224 206 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 CXCR1P25024 350 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 CHRNEQ04844 493 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 IGFN1Q86VF2 1251 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 CHPT1Q8WUD6 406 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 LRFN1Q9P244 771 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 RPH3AQ9Y2J0 694 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 ELOA3DA6NLF2 546 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 PLOD3O60568 738 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 NADKO95544 446 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 TSPAN19P0C672 248 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 GGT2P36268 569 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 CRISP1P54107 249 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 TRIM16LQ309B1 348 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 ELOA3BQ3SY89 546 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 UBQLNLQ8IYU4 475 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 ELOA3Q8NG57 546 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 RHOXF1Q8NHV9 184 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 THAP4Q8WY91 577 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 SPSB2Q99619 263 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 HOXD1Q9GZZ0 328 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 ZNF71Q9NQZ8 489 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 TBCCD1Q9NVR7 557 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 VDAC3Q9Y277 283 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 B3GNT3Q9Y2A9 372 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 SH3D21A4FU49 640 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 DBIP07108 87 aaKnown RBP11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 CENPAP49450 140 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 SMSP52788 366 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 PDZK1Q5T2W1 519 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 SLC22A10Q63ZE4 541 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 B3GNTL1Q67FW5 361 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 FAM198BQ6UWH4 519 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 SLC34A3Q8N130 599 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 SLIRPQ9GZT3 109 aaKnown RBP11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 UBQLN4Q9NRR5 601 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 SERINC1Q9NRX5 453 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 SIRT3Q9NTG7 399 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 PSORS1C1Q9UIG5 152 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 GSTK1Q9Y2Q3 226 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 YARS2Q9Y2Z4 477 aaKnown RBP11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 TMEM131Q92545 1883 aa11.47□□□□□ -0.57
SYNGAP1-207ENST00000628646 HRKO00198 91 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 PCDH17O14917 1159 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 FRS3O43559 492 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 SERPINA7P05543 415 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 PPICP45877 212 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 MAP4K2Q12851 820 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 DCAF10Q5QP82 559 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 MEDAGQ5VYS4 303 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 WFDC6Q9BQY6 131 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 CRNNQ9UBG3 495 aaPredicted RBP11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 DSPPQ9NZW4 1301 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 TCRBV16S1A1N1A0A5B0 115 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 CPSF4LA6NMK7 179 aaKnown RBP11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 LCKP06239 509 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 GABRA4P48169 554 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 MED22Q15528 200 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 CDCP2Q5VXM1 449 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 ZNF619Q8N2I2 560 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 TOR1AIP2Q8NFQ8 470 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 OR14L1PQ8NHC6 308 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 RPL3LQ92901 407 aaKnown RBP11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 MCHR1Q99705 422 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 PINK1Q9BXM7 581 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 WWTR1Q9GZV5 400 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 RERGLQ9H628 205 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 HS3ST3B1Q9Y662 390 aa11.46□□□□□ -0.57
SYNGAP1-207ENST00000628646 PRAMEF27A3QJZ7 478 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 AIREO43918 545 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 PLA2G5P39877 138 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 DUSP7Q16829 419 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 ZCCHC12Q6PEW1 402 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 LINC00299Q6ZSB3 139 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 MCEMP1Q8IX19 187 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms