RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 HMGN4O00479 90 aa11.58□□□□□ -0.56
LITAF-221ENST00000622633 TPST2O60704 377 aa11.58□□□□□ -0.56
LITAF-221ENST00000622633 SLC34A2O95436 690 aa11.58□□□□□ -0.56
LITAF-221ENST00000622633 PIPP12273 146 aaPredicted RBP11.58□□□□□ -0.56
LITAF-221ENST00000622633 ADRB3P13945 408 aa11.58□□□□□ -0.56
LITAF-221ENST00000622633 MST1P26927 711 aa11.58□□□□□ -0.56
LITAF-221ENST00000622633 BSGP35613 385 aa11.58□□□□□ -0.56
LITAF-221ENST00000622633 RAB5BP61020 215 aa11.58□□□□□ -0.56
LITAF-221ENST00000622633 ST8SIA6P61647 398 aa11.58□□□□□ -0.56
LITAF-221ENST00000622633 UBE2IP63279 158 aaKnown RBP11.58□□□□□ -0.56
LITAF-221ENST00000622633 SKP2Q13309 424 aa11.58□□□□□ -0.56
LITAF-221ENST00000622633 PIN1Q13526 163 aaPredicted RBP11.58□□□□□ -0.56
LITAF-221ENST00000622633 SPHARQ15513 63 aa11.58□□□□□ -0.56
LITAF-221ENST00000622633 KHDRBS2Q5VWX1 349 aaKnown RBP11.58□□□□□ -0.56
LITAF-221ENST00000622633 PLPP4Q5VZY2 271 aa11.58□□□□□ -0.56
LITAF-221ENST00000622633 HSDL2Q6YN16 418 aa11.58□□□□□ -0.56
LITAF-221ENST00000622633 HMGN2P46Q86SG4 172 aa11.58□□□□□ -0.56
LITAF-221ENST00000622633 OR4N4Q8N0Y3 316 aa11.58□□□□□ -0.56
LITAF-221ENST00000622633 OTUB1Q96FW1 271 aaPredicted RBP11.58□□□□□ -0.56
LITAF-221ENST00000622633 LRRC3BQ96PB8 259 aa11.58□□□□□ -0.56
LITAF-221ENST00000622633 OR2M2Q96R28 347 aa11.58□□□□□ -0.56
LITAF-221ENST00000622633 POLR2J3Q9H1A7 115 aaKnown RBP11.58□□□□□ -0.56
LITAF-221ENST00000622633 SEMA3GQ9NS98 782 aa11.58□□□□□ -0.56
LITAF-221ENST00000622633 SIRT3Q9NTG7 399 aaPredicted RBP11.58□□□□□ -0.56
LITAF-221ENST00000622633 NPTNQ9Y639 398 aa11.58□□□□□ -0.56
LITAF-221ENST00000622633 MYO7AQ13402 2215 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 CASC3O15234 703 aaKnown RBP11.57□□□□□ -0.56
LITAF-221ENST00000622633 SLC28A2O43868 658 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 CDRT1O95170 752 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 RPS2P15880 293 aaKnown RBP11.57□□□□□ -0.56
LITAF-221ENST00000622633 C4BPBP20851 252 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 CRYBB2P43320 205 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 ZP1P60852 638 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.57□□□□□ -0.56
LITAF-221ENST00000622633 HNRNPA0Q13151 305 aaKnown RBP11.57□□□□□ -0.56
LITAF-221ENST00000622633 PGBD2Q6P3X8 592 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 ZC3H14Q6PJT7 736 aaKnown RBP11.57□□□□□ -0.56
LITAF-221ENST00000622633 CLEC2AQ6UVW9 174 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 LCTLQ6UWM7 567 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 UNQ6494/PRO21346Q6UXR6 183 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 CASP12Q6UXS9 341 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 PGAP1Q75T13 922 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 SZRD1Q7Z422 152 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 C17orf64Q86WR6 236 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 POMGNT2Q8NAT1 580 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 OR2L2Q8NH16 312 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 MARS2Q96GW9 593 aaKnown RBP11.57□□□□□ -0.56
LITAF-221ENST00000622633 SLC6A18Q96N87 628 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 MS4A4EQ96PG1 132 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 YIPF4Q9BSR8 244 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 TSSK6Q9BXA6 273 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 CFHR5Q9BXR6 569 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 OR52A5Q9H2C5 316 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 TVP23BQ9NYZ1 205 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 PPP4R1LQ9P1A2 415 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 METTL1Q9UBP6 276 aaKnown RBP11.57□□□□□ -0.56
LITAF-221ENST00000622633 SLC23A2Q9UGH3 650 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 CA5BQ9Y2D0 317 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 A0A0G2JN53 185 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 PRAMEF27A3QJZ7 478 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 HEPACAM2A8MVW5 462 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 DISC1C4P0D8 188 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 H7BY64 318 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 CACNB4O00305 520 aaPredicted RBP11.57□□□□□ -0.56
LITAF-221ENST00000622633 FAAHO00519 579 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 LCMT2O60294 686 aaKnown RBP11.57□□□□□ -0.56
LITAF-221ENST00000622633 FKTNO75072 461 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 OR12D1P0DN82 309 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 ITGA3P26006 1051 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 ITGB7P26010 798 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 PSMB5P28074 263 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 ETV5P41161 510 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 CNTN1Q12860 1018 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 SYPL1Q16563 259 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 GUCA2BQ16661 112 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 ZNF697Q5TEC3 545 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 B3GNTL1Q67FW5 361 aaPredicted RBP11.57□□□□□ -0.56
LITAF-221ENST00000622633 ZNF57Q68EA5 555 aaPredicted RBP11.57□□□□□ -0.56
LITAF-221ENST00000622633 C12orf73Q69YU5 71 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 ARHGAP11AQ6P4F7 1023 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 COMTD1Q86VU5 262 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 AMER3Q8N944 861 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 SLC7A13Q8TCU3 470 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 SMPDL3AQ92484 453 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 TFGQ92734 400 aaPredicted RBP11.57□□□□□ -0.56
LITAF-221ENST00000622633 ZNF707Q96C28 371 aaPredicted RBP11.57□□□□□ -0.56
LITAF-221ENST00000622633 ELMOD3Q96FG2 381 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 LINC00615Q96LM1 132 aaPredicted RBP11.57□□□□□ -0.56
LITAF-221ENST00000622633 PRAP1Q96NZ9 151 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 TSNAXQ99598 290 aaKnown RBP11.57□□□□□ -0.56
LITAF-221ENST00000622633 MS4A8Q9BY19 250 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 METTL9Q9H1A3 318 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 DPEP2Q9H4A9 486 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 ZFP57Q9NU63 452 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 ZNF624Q9P2J8 865 aaPredicted RBP11.57□□□□□ -0.56
LITAF-221ENST00000622633 IRAK3Q9Y616 596 aa11.57□□□□□ -0.56
LITAF-221ENST00000622633 A0A1W2PPE3 182 aa11.56□□□□□ -0.56
LITAF-221ENST00000622633 PRRT4C9JH25 899 aa11.56□□□□□ -0.56
LITAF-221ENST00000622633 M0R3H8 397 aa11.56□□□□□ -0.56
LITAF-221ENST00000622633 TLX2O43763 284 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms