RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 NAMPTP43490 491 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 ARHGDIAP52565 204 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 CDH4P55283 916 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 C21orf59P57076 290 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 TSPAN5P62079 268 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 PPIDQ08752 370 aaKnown RBP3.08□□□□□ -1.92
BRCA1-229ENST00000621897 MERTKQ12866 999 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 SLAQ13239 276 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 CAPRIN1Q14444 709 aaKnown RBP3.08□□□□□ -1.92
BRCA1-229ENST00000621897 ANGPT1Q15389 498 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 MAPRE2Q15555 327 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 IL23RQ5VWK5 629 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 MLIPQ5VWP3 458 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 LYPLAL1Q5VWZ2 237 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 TTC23Q5W5X9 447 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 SLC25A25Q6KCM7 469 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 SYT10Q6XYQ8 523 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 Q6ZPB1 254 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-229ENST00000621897 BHLHA15Q7RTS1 189 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-229ENST00000621897 VPS36Q86VN1 386 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 LRRC6Q86X45 466 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 CDKL3Q8IVW4 592 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-229ENST00000621897 CCDC36Q8IYA8 594 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 ZNF683Q8IZ20 524 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 FAM58AQ8N1B3 248 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 ANKFN1Q8N957 763 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 FNDC5Q8NAU1 212 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 RNF149Q8NC42 400 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 KIAA0895Q8NCT3 520 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 OR4K14Q8NGD5 310 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 OR4A16Q8NH70 328 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 CDC26Q8NHZ8 85 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 NDNFQ8TB73 568 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 GPX8Q8TED1 209 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 KIFAP3Q92845 792 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 TNFRSF14Q92956 283 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 COQ2Q96H96 371 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 PANX1Q96RD7 426 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 RAB40CQ96S21 281 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 NPAS2Q99743 824 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 BBS2Q9BXC9 721 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 DEFB126Q9BYW3 111 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 SHCBP1LQ9BZQ2 653 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 CUEDC2Q9H467 287 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 FBXO44Q9H4M3 255 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 ZDHHC6Q9H6R6 413 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 GEMIN7Q9H840 131 aaKnown RBP3.08□□□□□ -1.92
BRCA1-229ENST00000621897 NT5DC2Q9H857 520 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 GPR173Q9NS66 373 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 MIS18AQ9NYP9 233 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 RDH8Q9NYR8 311 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 GCNT4Q9P109 453 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 ZNF319Q9P2F9 582 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 SEC14L3Q9UDX4 400 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 HMGXB4Q9UGU5 601 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 STAP1Q9ULZ2 295 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 FOXJ3Q9UPW0 622 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 ERVK-19Q9WJR5 959 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 SLC22A14Q9Y267 594 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 OR10H1Q9Y4A9 318 aa3.08□□□□□ -1.92
BRCA1-229ENST00000621897 IGKV6D-21A0A0A0MT36 114 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 IQANK1A0A1B0GTG1 560 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 TUBAL3A6NHL2 446 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 OR2AG2A6NM03 316 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 PDZK1P1A8MUH7 402 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 PPIAL4DF5H284 164 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 HAS3O00219 553 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 PDXKO00764 312 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 ARPC3O15145 178 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 PSMD3O43242 534 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 DFNA5O60443 496 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 LRP3O75074 770 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 BCAS1O75363 584 aaPredicted RBP3.07□□□□□ -1.92
BRCA1-229ENST00000621897 UPK3AO75631 287 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 UFL1O94874 794 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 MBP02144 154 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 DBTP11182 482 aaKnown RBP3.07□□□□□ -1.92
BRCA1-229ENST00000621897 CPA3P15088 417 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 CYP3A5P20815 502 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 NT5EP21589 574 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 TUBG1P23258 451 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 OR1D2P34982 312 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 TRIM23P36406 574 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 PTGFRP43088 359 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 BRCC3P46736 316 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 RPS5P46782 204 aaKnown RBP3.07□□□□□ -1.92
BRCA1-229ENST00000621897 POU3F4P49335 361 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 CSNK1EP49674 416 aaKnown RBP3.07□□□□□ -1.92
BRCA1-229ENST00000621897 ACKR1Q16570 336 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 HSDL1Q3SXM5 330 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 HSP90AA4PQ58FG1 418 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 CTSL3PQ5NE16 218 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 PDZK1Q5T2W1 519 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 LIPJQ5W064 366 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 SPECC1LQ69YQ0 1117 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 ZSCAN25Q6NSZ9 544 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 FAM173BQ6P4H8 233 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 BLOC1S2Q6QNY1 142 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 COPS6Q7L5N1 327 aa3.07□□□□□ -1.92
BRCA1-229ENST00000621897 ERASQ7Z444 233 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms