RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 A0A1B0GX12 115 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 JUNBP17275 347 aaPredicted RBP16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 MST1P26927 711 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 TMED10P49755 219 aaKnown RBP16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 GAS1P54826 345 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 GABARAPL2P60520 117 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 CLN3Q13286 438 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 TOMM34Q15785 309 aaPredicted RBP16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 ZSWIM7Q19AV6 140 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 C11orf91Q3C1V1 193 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 H3F3CQ6NXT2 135 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 PRICKLE2Q7Z3G6 844 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 P3H2Q8IVL5 708 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 SLC15A4Q8N697 577 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 RNF138Q8WVD3 245 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 OIT3Q8WWZ8 545 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 LAT2Q9GZY6 243 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 CPAMD8Q8IZJ3 1885 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 IDH2P48735 452 aaKnown RBP16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 NUP107P57740 925 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 INPP5JQ15735 1006 aaPredicted RBP16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 PRAMEF20Q5VT98 475 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 ZNF773Q6PK81 442 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 ZNF730Q6ZMV8 503 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 ZER1Q7Z7L7 766 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 ARMC10Q8N2F6 343 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 NR4A3Q92570 626 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 TTC9Q92623 222 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 SLC38A4Q969I6 547 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 SLC35B4Q969S0 331 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 NXPE2Q96DL1 559 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 PSD2Q9BQI7 771 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 SCNM1Q9BWG6 230 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 TRIM2Q9C040 744 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 ING2Q9H160 280 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 EXOSC3Q9NQT5 275 aaKnown RBP16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 FAM118AQ9NWS6 357 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 KLRF1Q9NZS2 232 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 ICAM5Q9UMF0 924 aa16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 CHCHD2Q9Y6H1 151 aaPredicted RBP16.98■□□□□ 0.31
SEMA6C-210ENST00000621728 F10P00742 488 aa16.97■□□□□ 0.31
SEMA6C-210ENST00000621728 ANXA8P13928 327 aa16.97■□□□□ 0.31
SEMA6C-210ENST00000621728 IFNA8P32881 189 aa16.97■□□□□ 0.31
SEMA6C-210ENST00000621728 UGT2B15P54855 530 aa16.97■□□□□ 0.31
SEMA6C-210ENST00000621728 CDH15P55291 814 aa16.97■□□□□ 0.31
SEMA6C-210ENST00000621728 TUBA3CQ13748 450 aa16.97■□□□□ 0.31
SEMA6C-210ENST00000621728 TBC1D25Q3MII6 688 aa16.97■□□□□ 0.31
SEMA6C-210ENST00000621728 ZNF613Q6PF04 617 aa16.97■□□□□ 0.31
SEMA6C-210ENST00000621728 OPN5Q6U736 354 aa16.97■□□□□ 0.31
SEMA6C-210ENST00000621728 Q6ZPB1 254 aaPredicted RBP16.97■□□□□ 0.31
SEMA6C-210ENST00000621728 ZNF440Q8IYI8 595 aa16.97■□□□□ 0.31
SEMA6C-210ENST00000621728 TMEM156Q8N614 296 aa16.97■□□□□ 0.31
SEMA6C-210ENST00000621728 LSMEM1Q8N8F7 131 aa16.97■□□□□ 0.31
SEMA6C-210ENST00000621728 PFN4Q8NHR9 129 aa16.97■□□□□ 0.31
SEMA6C-210ENST00000621728 DOK1Q99704 481 aa16.97■□□□□ 0.31
SEMA6C-210ENST00000621728 METTL7AQ9H8H3 244 aa16.97■□□□□ 0.31
SEMA6C-210ENST00000621728 EVA1AQ9H8M9 152 aa16.97■□□□□ 0.31
SEMA6C-210ENST00000621728 CFAP47Q6ZTR5 3102 aa16.97■□□□□ 0.31
SEMA6C-210ENST00000621728 KPNA4O00629 521 aaPredicted RBP16.96■□□□□ 0.31
SEMA6C-210ENST00000621728 SLC16A6O15403 523 aa16.96■□□□□ 0.31
SEMA6C-210ENST00000621728 IGFBP1P08833 259 aaPredicted RBP16.96■□□□□ 0.31
SEMA6C-210ENST00000621728 ITPKBP27987 946 aa16.96■□□□□ 0.31
SEMA6C-210ENST00000621728 RAPSNQ13702 412 aa16.96■□□□□ 0.31
SEMA6C-210ENST00000621728 ALG10BQ5I7T1 473 aa16.96■□□□□ 0.31
SEMA6C-210ENST00000621728 ACER2Q5QJU3 275 aa16.96■□□□□ 0.31
SEMA6C-210ENST00000621728 BROXQ5VW32 411 aa16.96■□□□□ 0.31
SEMA6C-210ENST00000621728 KLHL17Q6TDP4 642 aa16.96■□□□□ 0.31
SEMA6C-210ENST00000621728 NRMQ8IXM6 262 aa16.96■□□□□ 0.31
SEMA6C-210ENST00000621728 BEST3Q8N1M1 668 aa16.96■□□□□ 0.31
SEMA6C-210ENST00000621728 ACOT11Q8WXI4 607 aaPredicted RBP16.96■□□□□ 0.31
SEMA6C-210ENST00000621728 MUS81Q96NY9 551 aa16.96■□□□□ 0.31
SEMA6C-210ENST00000621728 CNIH4Q9P003 139 aa16.96■□□□□ 0.31
SEMA6C-210ENST00000621728 RPS6KB2Q9UBS0 482 aa16.96■□□□□ 0.31
SEMA6C-210ENST00000621728 HSPE1-MOB4S4R3N1 261 aa16.96■□□□□ 0.31
SEMA6C-210ENST00000621728 FRYQ5TBA9 3013 aa16.96■□□□□ 0.31
SEMA6C-210ENST00000621728 SPTBN4Q9H254 2564 aa16.96■□□□□ 0.31
SEMA6C-210ENST00000621728 ARRDC5A6NEK1 342 aa16.96■□□□□ 0.3
SEMA6C-210ENST00000621728 ARGFXA6NJG6 315 aa16.96■□□□□ 0.3
SEMA6C-210ENST00000621728 G3V3Y1 287 aa16.96■□□□□ 0.3
SEMA6C-210ENST00000621728 NUDT14O95848 222 aa16.96■□□□□ 0.3
SEMA6C-210ENST00000621728 CCL3P10147 92 aa16.96■□□□□ 0.3
SEMA6C-210ENST00000621728 ITGA3P26006 1051 aa16.96■□□□□ 0.3
SEMA6C-210ENST00000621728 CASP3P42574 277 aa16.96■□□□□ 0.3
SEMA6C-210ENST00000621728 COL28A1Q2UY09 1125 aa16.96■□□□□ 0.3
SEMA6C-210ENST00000621728 TMIGD2Q96BF3 282 aa16.96■□□□□ 0.3
SEMA6C-210ENST00000621728 C3orf49Q96BT1 292 aa16.96■□□□□ 0.3
SEMA6C-210ENST00000621728 FAM46AQ96IP4 442 aaKnown RBP16.96■□□□□ 0.3
SEMA6C-210ENST00000621728 POLR2J2Q9GZM3 115 aaKnown RBP16.96■□□□□ 0.3
SEMA6C-210ENST00000621728 POLR2J3Q9H1A7 115 aaKnown RBP16.96■□□□□ 0.3
SEMA6C-210ENST00000621728 ANKRD19PQ9H560 264 aa16.96■□□□□ 0.3
SEMA6C-210ENST00000621728 MED11Q9P086 117 aa16.96■□□□□ 0.3
SEMA6C-210ENST00000621728 CHP2O43745 196 aa16.95■□□□□ 0.3
SEMA6C-210ENST00000621728 CDC40O60508 579 aaKnown RBP eCLIP16.95■□□□□ 0.3
SEMA6C-210ENST00000621728 EIF4E2O60573 245 aaKnown RBP16.95■□□□□ 0.3
SEMA6C-210ENST00000621728 DCKP27707 260 aa16.95■□□□□ 0.3
SEMA6C-210ENST00000621728 GPR4P46093 362 aa16.95■□□□□ 0.3
SEMA6C-210ENST00000621728 GSSP48637 474 aa16.95■□□□□ 0.3
SEMA6C-210ENST00000621728 CLK3P49761 638 aaKnown RBP16.95■□□□□ 0.3
SEMA6C-210ENST00000621728 COPZ1P61923 177 aa16.95■□□□□ 0.3
SEMA6C-210ENST00000621728 MDGA2Q7Z553 956 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms