RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 KLHL28Q9NXS3 571 aa16.77■□□□□ 0.28
CIRBP-245ENST00000621399 ETV2O00321 342 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-245ENST00000621399 GSTA4O15217 222 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 SEC14L5O43304 696 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 FRS3O43559 492 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 AGFG2O95081 481 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 NTN1O95631 604 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 IFNA14P01570 189 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 OPN1LWP04000 364 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 T-ENOLP0DO92 83 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 PRG2P13727 222 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 IL11P20809 199 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 PTGER4P35408 488 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 ACAA2P42765 397 aaKnown RBP16.76■□□□□ 0.27
CIRBP-245ENST00000621399 COPZ1P61923 177 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 RAC1P63000 192 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 MERTKQ12866 999 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 GLIPR1L2Q4G1C9 344 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 C1orf185Q5T7R7 199 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 LILRA2Q8N149 483 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 SLC35B4Q969S0 331 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 TAMM41Q96BW9 452 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 TMEM185BQ9H7F4 350 aa16.76■□□□□ 0.27
CIRBP-245ENST00000621399 ERRFI1Q9UJM3 462 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-245ENST00000621399 FAAHO00519 579 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 ELK4P28324 431 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 KDELR2P33947 212 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 KCNJ5P48544 419 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 SUCLG1P53597 346 aaKnown RBP16.75■□□□□ 0.27
CIRBP-245ENST00000621399 PER3P56645 1201 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 CLDN20P56880 219 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 HOXC5Q00444 222 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 DUSP7Q16829 419 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 RTL6Q6ICC9 239 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 MTFR2Q6P444 385 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 POMZP3Q6PJE2 187 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 B3GNT6Q6ZMB0 384 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 PLEKHM3Q6ZWE6 761 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 CHMP1BQ7LBR1 199 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 GRINAQ7Z429 371 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 COMTD1Q86VU5 262 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 DEFB107AQ8IZN7 70 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 CADM2Q8N3J6 435 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 FAM26EQ8N5C1 309 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 RNF148Q8N7C7 305 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 ATP6V1C2Q8NEY4 427 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 TNIP2Q8NFZ5 429 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 ZPLD1Q8TCW7 415 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 RASSF5Q8WWW0 418 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 FIG4Q92562 907 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 CDRT15Q96T59 188 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 TUBA1CQ9BQE3 449 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 SERINC1Q9NRX5 453 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 PRDM4Q9UKN5 801 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 PACSIN3Q9UKS6 424 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 FAM215AQ9Y5M1 114 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 DNAJC13O75165 2243 aa16.75■□□□□ 0.27
CIRBP-245ENST00000621399 H0YC42 278 aa16.74■□□□□ 0.27
CIRBP-245ENST00000621399 CXCR6O00574 342 aa16.74■□□□□ 0.27
CIRBP-245ENST00000621399 EIF1AYO14602 144 aaKnown RBP16.74■□□□□ 0.27
CIRBP-245ENST00000621399 EFNA2O43921 213 aa16.74■□□□□ 0.27
CIRBP-245ENST00000621399 EPPINO95925 133 aa16.74■□□□□ 0.27
CIRBP-245ENST00000621399 C8BP07358 591 aa16.74■□□□□ 0.27
CIRBP-245ENST00000621399 APOBEC1P41238 236 aaKnown RBP16.74■□□□□ 0.27
CIRBP-245ENST00000621399 SLC1A3P43003 542 aa16.74■□□□□ 0.27
CIRBP-245ENST00000621399 HTR3AP46098 478 aa16.74■□□□□ 0.27
CIRBP-245ENST00000621399 CRYBA2P53672 197 aa16.74■□□□□ 0.27
CIRBP-245ENST00000621399 TPD52P55327 224 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-245ENST00000621399 SRSF1Q07955 248 aaKnown RBP eCLIP16.74■□□□□ 0.271e-11■■□□□ 12.7
CIRBP-245ENST00000621399 ACSF3Q4G176 576 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-245ENST00000621399 LRRC23Q53EV4 343 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-245ENST00000621399 SAMD4BQ5PRF9 694 aaKnown RBP16.74■□□□□ 0.27
CIRBP-245ENST00000621399 TMEM211Q6ICI0 200 aa16.74■□□□□ 0.27
CIRBP-245ENST00000621399 RPTNQ6XPR3 784 aa16.74■□□□□ 0.27
CIRBP-245ENST00000621399 RINLQ6ZS11 566 aa16.74■□□□□ 0.27
CIRBP-245ENST00000621399 RPRMLQ8N4K4 120 aa16.74■□□□□ 0.27
CIRBP-245ENST00000621399 RBM15BQ8NDT2 890 aaKnown RBP16.74■□□□□ 0.27
CIRBP-245ENST00000621399 GPR32P1Q8NGA4 272 aa16.74■□□□□ 0.27
CIRBP-245ENST00000621399 TRIB1Q96RU8 372 aa16.74■□□□□ 0.27
CIRBP-245ENST00000621399 DMRTA2Q96SC8 542 aa16.74■□□□□ 0.27
CIRBP-245ENST00000621399 EVA1AQ9H8M9 152 aa16.74■□□□□ 0.27
CIRBP-245ENST00000621399 FREM3P0C091 2139 aa16.73■□□□□ 0.27
CIRBP-245ENST00000621399 GJE1A6NN92 205 aa16.73■□□□□ 0.27
CIRBP-245ENST00000621399 SYT5O00445 386 aa16.73■□□□□ 0.27
CIRBP-245ENST00000621399 UBOX5O94941 541 aa16.73■□□□□ 0.27
CIRBP-245ENST00000621399 LGI1O95970 557 aa16.73■□□□□ 0.27
CIRBP-245ENST00000621399 CD247P20963 164 aa16.73■□□□□ 0.27
CIRBP-245ENST00000621399 TACR3P29371 465 aa16.73■□□□□ 0.27
CIRBP-245ENST00000621399 SFTPDP35247 375 aa16.73■□□□□ 0.27
CIRBP-245ENST00000621399 CPOXP36551 454 aa16.73■□□□□ 0.27
CIRBP-245ENST00000621399 POLR2HP52434 150 aaKnown RBP16.73■□□□□ 0.27
CIRBP-245ENST00000621399 DLX5P56178 289 aa16.73■□□□□ 0.27
CIRBP-245ENST00000621399 CLDN15P56746 228 aa16.73■□□□□ 0.27
CIRBP-245ENST00000621399 RGS8P57771 180 aaPredicted RBP16.73■□□□□ 0.27
CIRBP-245ENST00000621399 RPS3AP61247 264 aaKnown RBP16.73■□□□□ 0.27
CIRBP-245ENST00000621399 PMPCAQ10713 525 aa16.73■□□□□ 0.27
CIRBP-245ENST00000621399 SELENBP1Q13228 472 aa16.73■□□□□ 0.27
CIRBP-245ENST00000621399 WBP2NLQ6ICG8 309 aa16.73■□□□□ 0.27
CIRBP-245ENST00000621399 NCCRP1Q6ZVX7 275 aaPredicted RBP16.73■□□□□ 0.27
CIRBP-245ENST00000621399 GGNQ86UU5 652 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms