RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 RFLNBQ8N5W9 214 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 OR13C2Q8NGS9 318 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 LRRC3BQ96PB8 259 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 MS4A4EQ96PG1 132 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 EMC3Q9P0I2 261 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 RPS6KB2Q9UBS0 482 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 FBXL4Q9UKA2 621 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 ABT1Q9ULW3 272 aaKnown RBP18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 MAB21L2Q9Y586 359 aa18.13■□□□□ 0.49
PDLIM3-212ENST00000620787 LCN1P31025 176 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 EPHA4P54764 986 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 ARHGAP11BQ3KRB8 267 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 GPAT4Q86UL3 456 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 RNF113BQ8IZP6 322 aaKnown RBP18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 OR11G2Q8NGC1 345 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 OR2L8Q8NGY9 312 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 RBCK1Q9BYM8 510 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 RCBTB2O95199 551 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 GKN3PP0CG01 181 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 NT5EP21589 574 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 BLVRAP53004 296 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 RAB14P61106 215 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 ZSWIM7Q19AV6 140 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 EIPR1Q53HC9 387 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 ANKRD33Q7Z3H0 272 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 NRROSQ86YC3 692 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 FAM98AQ8NCA5 519 aaKnown RBP18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 GSX2Q9BZM3 304 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 CACYBPQ9HB71 228 aaKnown RBP18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 NKIRAS2Q9NYR9 191 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 NTMQ9P121 344 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 ACSL5Q9ULC5 683 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 SPATA2Q9UM82 520 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 FLVCR2Q9UPI3 526 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 SIGLEC7Q9Y286 467 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 SLC27A6Q9Y2P4 619 aa18.12■□□□□ 0.49
PDLIM3-212ENST00000620787 A0A1W2PPL8 197 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 M0R233 179 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 KHNYNO15037 678 aaKnown RBP18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 FLRT2O43155 660 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 GMDSO60547 372 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 FGF19O95750 216 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 NDUFS1P28331 727 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 P2RY2P41231 377 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 DUSP8Q13202 625 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 CRMP1Q14194 572 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 OR1Q1Q15612 314 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 DUSP5Q16690 384 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 Q6ZTK2 550 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 CDH24Q86UP0 819 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 CYB561A3Q8NBI2 242 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 OR2T4Q8NH00 348 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 WBP1Q96G27 269 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 C10orf90Q96M02 699 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 SLC35A3Q9Y2D2 325 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 PCDHGA9Q9Y5G4 932 aaKnown RBP18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 TBC1D3KA0A087X1G2 549 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 TBC1D3BA6NDS4 549 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 TBC1D3FA6NER0 549 aaPredicted RBP18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 LATO43561 262 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 ASGR2P07307 311 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 PTGS2P35354 604 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 SUZ12Q15022 739 aaKnown RBP18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 GPR68Q15743 365 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 TMEM255AQ5JRV8 349 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 TBC1D3GQ6DHY5 549 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 RPL13AP3Q6NVV1 102 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 SLITRK4Q8IW52 837 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 HDDC3Q8N4P3 179 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 UXS1Q8NBZ7 420 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 LGALS14Q8TCE9 139 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 POF1BQ8WVV4 589 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 RBPMSQ93062 196 aaKnown RBP18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 ERMAPQ96PL5 475 aaPredicted RBP18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 DDOQ99489 341 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 TTTY10Q9BZA0 68 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 OR6C2Q9NZP2 312 aa18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 MRPL15Q9P015 296 aaKnown RBP18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 PPIEQ9UNP9 301 aaKnown RBP18.11■□□□□ 0.49
PDLIM3-212ENST00000620787 RIIAD1A6NNX1 92 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 PRICKLE3O43900 615 aaPredicted RBP18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 TGM6O95932 706 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 AGR2O95994 175 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 HRGP04196 525 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 GYPBP06028 91 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 THBS1P07996 1170 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 ADRB1P08588 477 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 RPL6Q02878 288 aaKnown RBP18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 SFRP4Q6FHJ7 346 aaPredicted RBP18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 TMPRSS11FQ6ZWK6 438 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 SFTPA1Q8IWL2 248 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 BPIFA2Q96DR5 249 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 SDF2Q99470 211 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 HAO2Q9NYQ3 351 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 POMT2Q9UKY4 750 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 TRAV27A0A087WT01 109 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 OGG1O15527 345 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 RNGTTO60942 597 aaKnown RBP18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 SERPINA3P01011 423 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 TSFMP43897 325 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms