RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 PANX1Q96RD7 426 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 SAP130Q9H0E3 1048 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 MANSC1Q9H8J5 431 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 TIGARQ9NQ88 270 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 NKIRAS1Q9NYS0 192 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 MTORP42345 2549 aa15.3■□□□□ 0.04
HMGN3-203ENST00000620514 CCDC154A6NI56 674 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 CLDN24A6NM45 220 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 TRPC5OSA6NMA1 111 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 HMGN4O00479 90 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 ERLIN1O75477 346 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 PGRP06401 933 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 PABPC4LP0CB38 370 aaKnown RBP15.29■□□□□ 0.04
HMGN3-203ENST00000620514 SLC7A1P30825 629 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 ADAM8P78325 824 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 CHRNEQ04844 493 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 FOXD4Q12950 439 aaPredicted RBP15.29■□□□□ 0.04
HMGN3-203ENST00000620514 SYPL1Q16563 259 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 GPAT3Q53EU6 434 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 ATG16L1Q676U5 607 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 BEND4Q6ZU67 534 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 ZNF619Q8N2I2 560 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 ANKFN1Q8N957 763 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 FAM71CQ8NEG0 241 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 ST8SIA1Q92185 356 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 MAELQ96JY0 434 aaKnown RBP15.29■□□□□ 0.04
HMGN3-203ENST00000620514 POLE3Q9NRF9 147 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 KLHL13Q9P2N7 655 aa15.29■□□□□ 0.04
HMGN3-203ENST00000620514 ZNF469Q96JG9 3925 aaPredicted RBP15.28■□□□□ 0.04
HMGN3-203ENST00000620514 GUSBP08236 651 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 PGCP20142 388 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 RYKP34925 604 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 RIPPLY3P57055 190 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 PPP2R2AP63151 447 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 MERTKQ12866 999 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 RNPS1Q15287 305 aaKnown RBP15.28■□□□□ 0.04
HMGN3-203ENST00000620514 COX20Q5RI15 118 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 TMEM201Q5SNT2 666 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 AP1ARQ63HQ0 302 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 C3orf33Q6P1S2 294 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 ZNF621Q6ZSS3 439 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 PLEKHM3Q6ZWE6 761 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 WFDC11Q8NEX6 87 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 RAB3IL1Q8TBN0 382 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 PNPT1Q8TCS8 783 aaKnown RBP15.28■□□□□ 0.04
HMGN3-203ENST00000620514 OR5B2Q96R09 309 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 ZBTB18Q99592 522 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 UBTD1Q9HAC8 227 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 SLC6A13Q9NSD5 602 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 ACER3Q9NUN7 267 aa15.28■□□□□ 0.04
HMGN3-203ENST00000620514 ING1Q9UK53 422 aaPredicted RBP15.28■□□□□ 0.04
HMGN3-203ENST00000620514 C2CD3Q4AC94 2353 aa15.27■□□□□ 0.04
HMGN3-203ENST00000620514 MAP1AP78559 2803 aaPredicted RBP15.27■□□□□ 0.04
HMGN3-203ENST00000620514 SLCO1B7G3V0H7 640 aa15.27■□□□□ 0.04
HMGN3-203ENST00000620514 KLF4O43474 513 aa15.27■□□□□ 0.04
HMGN3-203ENST00000620514 ADAM11O75078 769 aa15.27■□□□□ 0.04
HMGN3-203ENST00000620514 PRKD3O94806 890 aa15.27■□□□□ 0.04
HMGN3-203ENST00000620514 CHRM4P08173 479 aa15.27■□□□□ 0.04
HMGN3-203ENST00000620514 RAC3P60763 192 aa15.27■□□□□ 0.04
HMGN3-203ENST00000620514 HPCAP84074 193 aa15.27■□□□□ 0.04
HMGN3-203ENST00000620514 TSC22D1Q15714 1073 aa15.27■□□□□ 0.04
HMGN3-203ENST00000620514 PDCD4Q53EL6 469 aaKnown RBP15.27■□□□□ 0.04
HMGN3-203ENST00000620514 TFAP2EQ6VUC0 442 aa15.27■□□□□ 0.04
HMGN3-203ENST00000620514 DNAJC14Q6Y2X3 702 aaPredicted RBP15.27■□□□□ 0.04
HMGN3-203ENST00000620514 STK32CQ86UX6 486 aa15.27■□□□□ 0.04
HMGN3-203ENST00000620514 CXorf67Q86X51 503 aaPredicted RBP15.27■□□□□ 0.04
HMGN3-203ENST00000620514 KRTAP1-3Q8IUG1 177 aa15.27■□□□□ 0.04
HMGN3-203ENST00000620514 TRIML2Q8N7C3 387 aa15.27■□□□□ 0.04
HMGN3-203ENST00000620514 ARL8AQ96BM9 186 aa15.27■□□□□ 0.04
HMGN3-203ENST00000620514 OR52B2Q96RD2 323 aa15.27■□□□□ 0.04
HMGN3-203ENST00000620514 ACTR6Q9GZN1 396 aa15.27■□□□□ 0.04
HMGN3-203ENST00000620514 SLC38A1Q9H2H9 487 aa15.27■□□□□ 0.04
HMGN3-203ENST00000620514 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.27■□□□□ 0.04
HMGN3-203ENST00000620514 SLC35A3Q9Y2D2 325 aa15.27■□□□□ 0.04
HMGN3-203ENST00000620514 ACANP16112 2415 aa15.26■□□□□ 0.03
HMGN3-203ENST00000620514 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.26■□□□□ 0.03
HMGN3-203ENST00000620514 SMAD9O15198 467 aaKnown RBP15.26■□□□□ 0.03
HMGN3-203ENST00000620514 DIAPH2O60879 1101 aa15.26■□□□□ 0.03
HMGN3-203ENST00000620514 GCM2O75603 506 aaPredicted RBP15.26■□□□□ 0.03
HMGN3-203ENST00000620514 SLC22A3O75751 556 aa15.26■□□□□ 0.03
HMGN3-203ENST00000620514 YES1P07947 543 aa15.26■□□□□ 0.03
HMGN3-203ENST00000620514 IDO1P14902 403 aa15.26■□□□□ 0.03
HMGN3-203ENST00000620514 PPP3CBP16298 524 aa15.26■□□□□ 0.03
HMGN3-203ENST00000620514 KCNJ10P78508 379 aa15.26■□□□□ 0.03
HMGN3-203ENST00000620514 ACKR1Q16570 336 aa15.26■□□□□ 0.03
HMGN3-203ENST00000620514 WFDC8Q8IUA0 241 aa15.26■□□□□ 0.03
HMGN3-203ENST00000620514 GABRG1Q8N1C3 465 aa15.26■□□□□ 0.03
HMGN3-203ENST00000620514 ZNF563Q8TA94 476 aa15.26■□□□□ 0.03
HMGN3-203ENST00000620514 TMEM234Q8WY98 164 aa15.26■□□□□ 0.03
HMGN3-203ENST00000620514 CNOT9Q92600 299 aaKnown RBP15.26■□□□□ 0.03
HMGN3-203ENST00000620514 ZNF75CPQ92670 426 aaPredicted RBP15.26■□□□□ 0.03
HMGN3-203ENST00000620514 ZNF775Q96BV0 537 aaPredicted RBP15.26■□□□□ 0.03
HMGN3-203ENST00000620514 DNAJA3Q96EY1 480 aa15.26■□□□□ 0.03
HMGN3-203ENST00000620514 PSD2Q9BQI7 771 aa15.26■□□□□ 0.03
HMGN3-203ENST00000620514 CTPS2Q9NRF8 586 aa15.26■□□□□ 0.03
HMGN3-203ENST00000620514 SERINC1Q9NRX5 453 aa15.26■□□□□ 0.03
HMGN3-203ENST00000620514 BEX4Q9NWD9 120 aaPredicted RBP15.26■□□□□ 0.03
HMGN3-203ENST00000620514 GPR52Q9Y2T5 361 aa15.26■□□□□ 0.03
HMGN3-203ENST00000620514 PRR14LQ5THK1 2151 aa15.26■□□□□ 0.03
HMGN3-203ENST00000620514 FREM1Q5H8C1 2179 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms