RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 FAM173AQ9BQD7 235 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 PRSS27Q9BQR3 290 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 FUZQ9BT04 418 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.3□□□□□ -1.24
CPNE3-209ENST00000620393 ANKRD19PQ9H560 264 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 PTGES2Q9H7Z7 377 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 C12orf10Q9HB07 376 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 SLC24A3Q9HC58 644 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 CTPS2Q9NRF8 586 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 MAN2C1Q9NTJ4 1040 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 DEPPQ9NTK1 212 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 VNN3Q9NY84 501 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 RHCGQ9UBD6 479 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 RPS6KB2Q9UBS0 482 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 KLF13Q9Y2Y9 288 aaPredicted RBP7.3□□□□□ -1.24
CPNE3-209ENST00000620393 PCDHGB7Q9Y5F8 929 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 PCDHGB6Q9Y5F9 930 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 LYVE1Q9Y5Y7 322 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 U3KQV3 271 aa7.3□□□□□ -1.24
CPNE3-209ENST00000620393 AKAP13Q12802 2813 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 FREM2Q5SZK8 3169 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 NCOR2Q9Y618 2525 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 A0A087WZY1 265 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 G3V3Y1 287 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 MKRN2OSH3BPM6 223 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 KLRC4-KLRK1H3BQV0 150 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 ETV2O00321 342 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-209ENST00000620393 GMFGO60234 142 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 NME2P1O60361 137 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 ZIC3O60481 467 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 CDC40O60508 579 aaKnown RBP eCLIP7.29□□□□□ -1.24
CPNE3-209ENST00000620393 E2F6O75461 281 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 NUDT14O95848 222 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 ITGB2P05107 769 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 PNMTP11086 282 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 GP1BBP13224 206 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 NME2P22392 152 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 ELAVL4P26378 380 aaKnown RBP7.29□□□□□ -1.24
CPNE3-209ENST00000620393 PTDSS1P48651 473 aaKnown RBP7.29□□□□□ -1.24
CPNE3-209ENST00000620393 DNASE1L1P49184 302 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 FOXD4Q12950 439 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-209ENST00000620393 QPRTQ15274 297 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 TOMM34Q15785 309 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-209ENST00000620393 SNCBQ16143 134 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 MICAQ29983 383 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 GLYR1Q49A26 553 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-209ENST00000620393 SLC25A53Q5H9E4 307 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 ZNF766Q5HY98 468 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 ALG10BQ5I7T1 473 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 DCST1Q5T197 706 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 OGFRL1Q5TC84 451 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-209ENST00000620393 LPCAT4Q643R3 524 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 PODNL1Q6PEZ8 512 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 ARSKQ6UWY0 536 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 ZBTB49Q6ZSB9 765 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 STK32CQ86UX6 486 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 ZDHHC13Q8IUH4 622 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 NKAIN4Q8IVV8 208 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 RNF113BQ8IZP6 322 aaKnown RBP7.29□□□□□ -1.24
CPNE3-209ENST00000620393 SVOPLQ8N434 492 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 ZADH2Q8N4Q0 377 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 LINC00471Q8N535 108 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 OR2M7Q8NG81 312 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 SLC7A13Q8TCU3 470 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 GIPC3Q8TF64 312 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 NRG4Q8WWG1 115 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 ST8SIA1Q92185 356 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 TM9SF4Q92544 642 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 SLC38A4Q969I6 547 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 C3orf49Q96BT1 292 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 C1GALT1C1Q96EU7 318 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 SCMH1Q96GD3 660 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 MPP4Q96JB8 637 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 JSRP1Q96MG2 331 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-209ENST00000620393 C5orf34Q96MH7 638 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 HS6ST2Q96MM7 605 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 SLC29A1Q99808 456 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 C9orf16Q9BUW7 83 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 COQ10BQ9H8M1 238 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 ZFP64Q9NPA5 681 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 KLHL1Q9NR64 748 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 MED17Q9NVC6 651 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 TUBA8Q9NY65 449 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-209ENST00000620393 TAS2R10Q9NYW0 307 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 SELENONQ9NZV5 590 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 FBXL2Q9UKC9 423 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 TMCC3Q9ULS5 477 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 SLC7A7Q9UM01 511 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 OAZ3Q9UMX2 235 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 MRPS18CQ9Y3D5 142 aaKnown RBP7.29□□□□□ -1.24
CPNE3-209ENST00000620393 HRH3Q9Y5N1 445 aa7.29□□□□□ -1.24
CPNE3-209ENST00000620393 MAGED1Q9Y5V3 778 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-209ENST00000620393 ACACAQ13085 2346 aa7.28□□□□□ -1.24
CPNE3-209ENST00000620393 MED13Q9UHV7 2174 aa7.28□□□□□ -1.24
CPNE3-209ENST00000620393 A0A087WUJ7 227 aa7.28□□□□□ -1.24
CPNE3-209ENST00000620393 A0A087WUU8 490 aa7.28□□□□□ -1.24
CPNE3-209ENST00000620393 TRAV17A0A0B4J275 112 aa7.28□□□□□ -1.24
CPNE3-209ENST00000620393 A0A0G2JMM0 328 aa7.28□□□□□ -1.24
CPNE3-209ENST00000620393 TRBV4-1A0A0J9YWV2 114 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms