RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 SMPDL3BQ92485 455 aa13.02□□□□□ -0.32
COL6A1-207ENST00000612273 HSD17B8Q92506 261 aa13.02□□□□□ -0.32
COL6A1-207ENST00000612273 ERMAPQ96PL5 475 aaPredicted RBP13.02□□□□□ -0.32
COL6A1-207ENST00000612273 DERL3Q96Q80 235 aa13.02□□□□□ -0.32
COL6A1-207ENST00000612273 OR14A2Q96R54 314 aa13.02□□□□□ -0.32
COL6A1-207ENST00000612273 TIMP4Q99727 224 aa13.02□□□□□ -0.32
COL6A1-207ENST00000612273 C1QTNF2Q9BXJ5 285 aa13.02□□□□□ -0.32
COL6A1-207ENST00000612273 ARID1AO14497 2285 aa13.02□□□□□ -0.32
COL6A1-207ENST00000612273 C4orf47A7E2U8 309 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 DHFRP00374 187 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 MT-ND5P03915 603 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 FAM157BP0CG42 384 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 TRAPPC2P0DI81 140 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 TRAPPC2BP0DI82 140 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 RPL4P36578 427 aaKnown RBP13.02□□□□□ -0.33
COL6A1-207ENST00000612273 ZNF81P51508 661 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 ERVK-21P61565 698 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 TFF2Q03403 129 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 CRYZQ08257 329 aaKnown RBP13.02□□□□□ -0.33
COL6A1-207ENST00000612273 HBMQ6B0K9 141 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 TCTE3Q8IZS6 198 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 UXS1Q8NBZ7 420 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 OR52N1Q8NH53 320 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 SUN5Q8TC36 379 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 CLIP3Q96DZ5 547 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 ASB16Q96NS5 453 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 PRSS27Q9BQR3 290 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 SLC17A9Q9BYT1 436 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 CALML5Q9NZT1 146 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 KLHL21Q9UJP4 597 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 GNG8Q9UK08 70 aa13.02□□□□□ -0.33
COL6A1-207ENST00000612273 TRAPPC13A5PLN9 417 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 ACOD1A6NK06 481 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 RIIAD1A6NNX1 92 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 SYT5O00445 386 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 CHP2O43745 196 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 SLC43A1O75387 559 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 FGF19O95750 216 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 BMP8BP34820 402 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 RGS1Q08116 209 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 SUZ12Q15022 739 aaKnown RBP13.01□□□□□ -0.33
COL6A1-207ENST00000612273 DCST2Q5T1A1 773 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 BMP8AQ7Z5Y6 402 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 ASPGQ86U10 573 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 KIAA1143Q96AT1 154 aaPredicted RBP13.01□□□□□ -0.33
COL6A1-207ENST00000612273 OMA1Q96E52 524 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 MS4A4EQ96PG1 132 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 SOSTQ9BQB4 213 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 GON7Q9BXV9 100 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 EIF3KQ9UBQ5 218 aaKnown RBP13.01□□□□□ -0.33
COL6A1-207ENST00000612273 ZMIZ1Q9ULJ6 1067 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 DUXAA6NLW8 204 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 FGF17O60258 216 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 IGHA1P01876 353 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 HRGP04196 525 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 PRKAR1BP31321 381 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 ARPC4P59998 168 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 TRA2BP62995 288 aaKnown RBP13.01□□□□□ -0.33
COL6A1-207ENST00000612273 LINGO2Q7L985 606 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.01□□□□□ -0.33
COL6A1-207ENST00000612273 PIAS4Q8N2W9 510 aaPredicted RBP13.01□□□□□ -0.33
COL6A1-207ENST00000612273 KCNJ15Q99712 375 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 GAL3ST1Q99999 423 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 TEX101Q9BY14 249 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 TMEM168Q9H0V1 697 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 MEPEQ9NQ76 525 aaPredicted RBP13.01□□□□□ -0.33
COL6A1-207ENST00000612273 STMN3Q9NZ72 180 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 ADAM11O75078 769 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 GNRH1P01148 92 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 ANKRD34CP0C6C1 535 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 ATF1P18846 271 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 IGFALSP35858 605 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 RPS27P42677 84 aaKnown RBP13.01□□□□□ -0.33
COL6A1-207ENST00000612273 PPP2CBP62714 309 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 PPP2CAP67775 309 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 ERV3-1Q14264 604 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 PRRT3Q5FWE3 981 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 OR8K3Q8NH51 312 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 SFXN5Q8TD22 340 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 SNX33Q8WV41 574 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 MAP6Q96JE9 813 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 CYSLTR2Q9NS75 346 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 POLHQ9Y253 713 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 MED31Q9Y3C7 131 aa13.01□□□□□ -0.33
COL6A1-207ENST00000612273 OR6C74A6NCV1 312 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 SLC19A2O60779 497 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 CRYZL1O95825 349 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 TCRBP04435 133 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 SBK2P0C263 348 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 CT62P0C5K7 136 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 RAB3BP20337 219 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 SLC6A1P30531 599 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 FBXO42Q6P3S6 717 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 TRILQ7L0X0 811 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 LRRC28Q86X40 367 aaPredicted RBP13□□□□□ -0.33
COL6A1-207ENST00000612273 YAF2Q8IY57 180 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 SRFBP1Q8NEF9 429 aaKnown RBP13□□□□□ -0.33
COL6A1-207ENST00000612273 C1QTNF6Q9BXI9 259 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 FKRPQ9H9S5 495 aa13□□□□□ -0.33
COL6A1-207ENST00000612273 EVA1BQ9NVM1 165 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms