RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ZNF226Q9NYT6 803 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 CRIM1Q9NZV1 1036 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 IFT52Q9Y366 437 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 KIAA1549Q9HCM3 1950 aa11.07□□□□□ -0.64
CBWD3-208ENST00000612050 PKDREJQ9NTG1 2253 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 A0A096LPI6 279 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 A0A0G2JND7 137 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 A0A0G2JPF8 293 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 A0A0J9YW62 118 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 AGAP5A6NIR3 686 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 HNRNPCL2B2RXH8 293 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 HNRNPCL3B7ZW38 293 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 ANGPT2O15123 496 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 HNRNPCL1O60812 293 aaKnown RBP11.06□□□□□ -0.64
CBWD3-208ENST00000612050 TNFSF13O75888 250 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 PRKD3O94806 890 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 HNRNPCL4P0DMR1 293 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 PSMA4P25789 261 aaKnown RBP11.06□□□□□ -0.64
CBWD3-208ENST00000612050 PGM1P36871 562 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 CD79BP40259 229 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 PCYT1AP49585 367 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 SESN3P58005 492 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 BLOC1S3Q6QNY0 202 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 BEND4Q6ZU67 534 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 ZNF550Q7Z398 422 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 CDH24Q86UP0 819 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 KRT73Q86Y46 540 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 MED12LQ86YW9 2145 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 ANKFN1Q8N957 763 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 POC1BQ8TC44 478 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 DACH2Q96NX9 599 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 OR5B2Q96R09 309 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 SPATA5L1Q9BVQ7 753 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 SLC38A1Q9H2H9 487 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 CLEC4MQ9H2X3 399 aaPredicted RBP11.06□□□□□ -0.64
CBWD3-208ENST00000612050 GP6Q9HCN6 339 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 ACER3Q9NUN7 267 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 KLHL9Q9P2J3 617 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.06□□□□□ -0.64
CBWD3-208ENST00000612050 DCTN4Q9UJW0 460 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 MED12Q93074 2177 aa11.06□□□□□ -0.64
CBWD3-208ENST00000612050 UNC79Q9P2D8 2635 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 SH3D21A4FU49 640 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 CFAP73A6NFT4 308 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 A6NNC1 897 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 OIP5O43482 229 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 EDF1O60869 148 aaKnown RBP11.05□□□□□ -0.64
CBWD3-208ENST00000612050 SS18L1O75177 396 aaPredicted RBP11.05□□□□□ -0.64
CBWD3-208ENST00000612050 ETFAP13804 333 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 NID1P14543 1247 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 ENPP1P22413 925 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 KIR2DL2P43627 348 aaPredicted RBP11.05□□□□□ -0.64
CBWD3-208ENST00000612050 CLK1P49759 484 aaKnown RBP11.05□□□□□ -0.64
CBWD3-208ENST00000612050 MAP2K6P52564 334 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 RAC3P60763 192 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 TOMM34Q15785 309 aaPredicted RBP11.05□□□□□ -0.64
CBWD3-208ENST00000612050 ZNF239Q16600 458 aaKnown RBP11.05□□□□□ -0.64
CBWD3-208ENST00000612050 CTU2Q2VPK5 515 aaKnown RBP11.05□□□□□ -0.64
CBWD3-208ENST00000612050 COX20Q5RI15 118 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 PRAMEF8Q5VWM4 474 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 PRAMEF7Q5VXH5 474 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 METTL21CQ5VZV1 264 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 AP1ARQ63HQ0 302 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 VWA1Q6PCB0 445 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 SLC2A7Q6PXP3 512 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 PLEKHM3Q6ZWE6 761 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 FCRLAQ7L513 359 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 BTLAQ7Z6A9 289 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 OR52P1PQ8NH57 321 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 GTF2H4Q92759 462 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 DDIT4LQ96D03 193 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 STARD4Q96DR4 205 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 ADGRG7Q96K78 797 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 MED18Q9BUE0 208 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 MED4Q9NPJ6 270 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 CHRNA9Q9UGM1 479 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 LEF1Q9UJU2 399 aaPredicted RBP11.05□□□□□ -0.64
CBWD3-208ENST00000612050 SLC13A4Q9UKG4 626 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 PCDHB14Q9Y5E9 798 aa11.05□□□□□ -0.64
CBWD3-208ENST00000612050 A0A1W2PP18 115 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 C16orf97H3BN30 126 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 SULT2B1O00204 365 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 AQP8O94778 261 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 THBS1P07996 1170 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 CHRM4P08173 479 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 VIMP08670 466 aaKnown RBP11.04□□□□□ -0.64
CBWD3-208ENST00000612050 PPP3CBP16298 524 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 IDH2P48735 452 aaKnown RBP11.04□□□□□ -0.64
CBWD3-208ENST00000612050 POLR2HP52434 150 aaKnown RBP11.04□□□□□ -0.64
CBWD3-208ENST00000612050 FUT5Q11128 374 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 SNTB1Q13884 538 aaKnown RBP11.04□□□□□ -0.64
CBWD3-208ENST00000612050 DAZAP2Q15038 168 aaPredicted RBP11.04□□□□□ -0.64
CBWD3-208ENST00000612050 RGNQ15493 299 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 MAPK14Q16539 360 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 EXOC3L2Q2M3D2 409 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 SYT14P1Q58G82 188 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 MRPL2Q5T653 305 aaKnown RBP11.04□□□□□ -0.64
CBWD3-208ENST00000612050 OLIG3Q7RTU3 272 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 FAM71CQ8NEG0 241 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 BBS10Q8TAM1 723 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms